DeepSelecNet is an enhanced deep learning model to perform read classification for selective sequencing.
☆18Mar 5, 2023Updated 3 years ago
Alternatives and similar repositories for DeepSelectNet
Users that are interested in DeepSelectNet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A simple toolkit for manipulating nanopore signal data☆20Mar 14, 2026Updated 7 months ago
- ☆11Feb 16, 2023Updated 3 years ago
- A streaming method for mapping nanopore raw signals☆32Nov 7, 2021Updated 4 years ago
- Fast and scalable nanopore adaptive sampling☆37Jun 6, 2023Updated 3 years ago
- PHasing Reads in Areas Of Homozygosity☆14Feb 12, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Python3 Read Until API implementation☆11Mar 11, 2020Updated 6 years ago
- Read Until client library for Nanopore Sequencing☆107Sep 25, 2024Updated 2 years ago
- Computational pipeline for calling consensi on R2C2 nanopore data☆10Oct 2, 2025Updated last year
- ☆30Dec 22, 2023Updated 2 years ago
- Visualise and analyse nanopore (ONT) raw signals☆130Jun 11, 2026Updated 4 months ago
- ☆13May 27, 2025Updated last year
- Hardware Accelerated Read Until☆18Sep 30, 2025Updated last year
- VolcanoSV enables accurate and robust structural variant calling in diploid genomes from single-molecule long read sequencing☆10Sep 8, 2026Updated last month
- Slow5tools is a toolkit for converting (FAST5 <-> SLOW5), compressing, viewing, indexing and manipulating data in SLOW5 format.☆107Aug 26, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- RawHash can accurately and efficiently map raw nanopore signals to reference genomes of varying sizes (e.g., from viral to a human genome…☆70Jan 1, 2026Updated 9 months ago
- Python package for comparing genome assemblies and read data to the diploid Q100 benchmark☆21Oct 8, 2026Updated 3 weeks ago
- BLEND is a mechanism that can efficiently find fuzzy seed matches between sequences to significantly improve the performance and accuracy…☆47May 10, 2023Updated 3 years ago
- A library and tool for accessing remote BLOW5 files.☆25Jun 3, 2026Updated 4 months ago
- An FPGA-accelerated version of minimap2☆11May 30, 2023Updated 3 years ago
- CLI tool for flexible and fast adaptive sampling on ONT sequencers☆199Updated this week
- R package and wrapper functions for identifying serial structural variations from genome assemblies☆31Sep 21, 2024Updated 2 years ago
- SNP-Assisted SV Calling and Phasing Using ONT☆25Jul 9, 2023Updated 3 years ago
- A simplified version of Dorado built on top of S/BLOW5 format.☆42Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Deep learning framework for SV calling and genotyping☆118Nov 8, 2023Updated 2 years ago
- ☆24Feb 22, 2023Updated 3 years ago
- The buttery eel - a slow5 guppy/dorado basecaller wrapper☆45Feb 13, 2026Updated 8 months ago
- CS 61 problem sets for 2020☆12Dec 1, 2020Updated 5 years ago
- kmerfreq count K-mer (with size K) frequency from the input sequence data, typically sequencing reads data, and refe rence genome data is…☆20Mar 30, 2020Updated 6 years ago
- a tool for simulating nanopore raw signal data☆83Mar 4, 2026Updated 7 months ago
- Low level bindings and wrapper for slow5lib, an alternative for ONT Nanopore sequencing FAST5 output☆10Nov 5, 2024Updated last year
- Scripts and programs for the Holt Lab's MinION desktop☆32Nov 18, 2020Updated 5 years ago
- ☆14Oct 17, 2024Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- A workflow to analyse sequence mutations in CRISPR-CAS9 targeted amplicon sequencing data☆12Feb 1, 2024Updated 2 years ago
- Dynamic, adaptive sampling during nanopore sequencing☆39Jul 24, 2026Updated 3 months ago
- ☆15Aug 6, 2020Updated 6 years ago
- ☆12Apr 18, 2022Updated 4 years ago
- Complements Minimap2 for a fast and efficient Read-Until pipeline☆14Mar 21, 2023Updated 3 years ago
- Peregrine: Fast Genome Assembler Using SHIMMER Index☆102Feb 6, 2022Updated 4 years ago
- A bioinformatics tool for viewing and calculating base modification frequencies from BAM files☆46Oct 11, 2026Updated 2 weeks ago