goldman-gp-ebi / BOSS-RUNSLinks
Dynamic, adaptive sampling during nanopore sequencing
☆33Updated 3 weeks ago
Alternatives and similar repositories for BOSS-RUNS
Users that are interested in BOSS-RUNS are comparing it to the libraries listed below
Sorting:
- Panacus is a tool for computing statistics for GFA-formatted pangenome graphs☆107Updated last week
- WDL workflows for variant calling and assembly using ONT☆34Updated 2 weeks ago
- Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.☆54Updated 6 months ago
- Joint structural variant and copy number variant caller for HiFi sequencing data☆52Updated 2 weeks ago
- ☆28Updated 3 weeks ago
- ☆62Updated last week
- PacBio BAM toolkit☆43Updated 3 months ago
- Set of tools to manipulate and visualize modified base bam files☆56Updated 2 years ago
- A small bash script that automates sweeping Guppy parameters in an attempt to optimise basecalling rate☆30Updated 3 years ago
- Error correction of ONT transcript reads☆58Updated last year
- Methylation Phasing for Nanopore Sequencing☆48Updated 2 years ago
- ✏️ Genome assembly polishing & SNV detection☆68Updated 3 months ago
- PGR-TK: Pangenome Research Tool Kit☆99Updated last year
- Hybrid error correction of long reads using colored de Bruijn graphs☆100Updated 8 months ago
- perSVade: personalized Structural Variation detection☆39Updated 3 months ago
- Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads☆73Updated 2 months ago
- vcfdist: Accurately benchmarking phased variant calls☆80Updated last month
- Annotation helper tool for the manual curation of transposable element consensus sequences☆48Updated 2 months ago
- A tool for Racon polishing of miniasm assemblies☆75Updated 4 years ago
- Tools to annotate genomes using long read transcriptomics data☆45Updated 4 years ago
- k-mer learning materials☆70Updated 3 months ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- Simple pileup-based variant caller☆90Updated last month
- Detecting multi-genome synteny using minimizer graph mapping☆78Updated last month
- ☆40Updated 3 months ago
- Wally: Visualization of aligned sequencing reads and contigs☆117Updated last month
- DEPRECATED - Workflow for the comprehensive detection and prioritization of variants in human genomes with PacBio HiFi reads☆38Updated last year
- ☆48Updated 9 months ago
- 🔗Genome assembly scaffolder using minimizer graphs☆83Updated 8 months ago
- Toolkit for calling structural variants using short or long reads☆104Updated 2 weeks ago