goldman-gp-ebi / BOSS-RUNS
Dynamic, adaptive sampling during nanopore sequencing
☆30Updated last month
Alternatives and similar repositories for BOSS-RUNS:
Users that are interested in BOSS-RUNS are comparing it to the libraries listed below
- ☆27Updated 2 months ago
- WDL workflows for variant calling and assembly using ONT☆33Updated this week
- Structural variant discovery and genotyping from mapped PacBio HiFi data☆48Updated this week
- A local-haplotagging-based small and structural variant caller☆73Updated 2 weeks ago
- vcfdist: Accurately benchmarking phased variant calls☆80Updated this week
- Methylation Phasing for Nanopore Sequencing☆48Updated 2 years ago
- Set of tools to manipulate and visualize modified base bam files☆54Updated 2 years ago
- PGR-TK: Pangenome Research Tool Kit☆99Updated last year
- Panacus is a tool for computing statistics for GFA-formatted pangenome graphs☆100Updated last month
- Pipeline for de novo clustering of long transcriptomic reads☆26Updated 3 years ago
- crab go snap snap☆38Updated this week
- ☆38Updated 2 months ago
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆33Updated last year
- Toolkit for calling structural variants using short or long reads☆102Updated this week
- Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads☆72Updated 3 weeks ago
- Simple pileup-based variant caller☆89Updated this week
- perSVade: personalized Structural Variation detection☆39Updated last month
- ☆29Updated last week
- De novo clustering of long transcript reads into genes☆58Updated 3 years ago
- Wally: Visualization of aligned sequencing reads and contigs☆114Updated last week
- Hybrid error correction of long reads using colored de Bruijn graphs☆100Updated 6 months ago
- Tools to annotate genomes using long read transcriptomics data☆45Updated 4 years ago
- Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences.☆36Updated 3 weeks ago
- Error correction of ONT transcript reads☆58Updated last year
- REINDEER REad Index for abuNDancE quERy☆57Updated 8 months ago
- ☆46Updated 8 months ago
- Classifier for metagenomic sequences using FM-index with run-block compressed BWT.☆56Updated last month
- Pore-C support☆53Updated 2 years ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆65Updated 2 weeks ago
- MethPhaser: methylation-based haplotype phasing of human genomes☆48Updated last month