☆17Jul 28, 2025Updated last year
Alternatives and similar repositories for basecalling_architectures
Users that are interested in basecalling_architectures are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆31Jul 28, 2025Updated last year
- Hardware Accelerated Read Until☆18Sep 30, 2025Updated 11 months ago
- End-to-end simulation of nanopore sequencing signals with feed-forward transformers☆17Jun 4, 2026Updated 2 months ago
- a tool for simulating nanopore raw signal data☆81Mar 4, 2026Updated 5 months ago
- ☆13Jun 10, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An Efficient DNA Clustering algorithm based on Tree Structure.☆19Mar 28, 2023Updated 3 years ago
- ☆23Jan 18, 2026Updated 7 months ago
- A dataset of real DNA traces for benchmarking trace reconstruction algorithms☆23Nov 18, 2024Updated last year
- Deep DNA Storage: Scalable and Robust DNA-based Storage via Coding Theory and Deep Learning☆23May 13, 2025Updated last year
- A package to run real time analysis of nanopore methylation data.☆26Updated this week
- ☆20Oct 20, 2025Updated 10 months ago
- Shepherd: accurate clustering for correcting DNA barcode errors: https://doi.org/10.1093/bioinformatics/btac395☆12Nov 13, 2023Updated 2 years ago
- Python Implementation of A Class of Generalized RS-Codes with Faster Encoding and Decoding Algorithms☆17May 27, 2025Updated last year
- DeepSelecNet is an enhanced deep learning model to perform read classification for selective sequencing.☆18Mar 5, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Basecalling configuration prediction through FASTQ files☆34Mar 17, 2026Updated 5 months ago
- Collection of Singularity build files and scripts to create them for popular Linux Distributions☆10Jun 23, 2022Updated 4 years ago
- MetaProFi is a bloom filter based tool for storing and querying sequence data for accurate identification of functionally relevant geneti…☆13Apr 14, 2022Updated 4 years ago
- Script to convert a Garmin FIT file (Versions 1 and 2) to a GPX file suitable for upload to Strava☆10May 12, 2017Updated 9 years ago
- CircAST is a computational tool for circular RNA full-length assembly and quantification using RNA-Seq data.☆10Jun 17, 2021Updated 5 years ago
- 南方科技大学图书馆LaTeX培训讲座,⬇️是讨论区☆11Sep 7, 2021Updated 4 years ago
- A tool for visualising kmers in 2D space.☆14Feb 23, 2025Updated last year
- A shell script for enet authentication in SUSTech.☆11Jan 26, 2021Updated 5 years ago
- 镜像源自动同步脚本☆16Jan 6, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆19Dec 23, 2024Updated last year
- Code associated with: AutoStepfinder: A fast and automated step detection method for single-molecule analysis Luuk Loeff, Jacob W J Kerss…☆13Jun 12, 2024Updated 2 years ago
- isoCirc☆10Nov 27, 2023Updated 2 years ago
- ☆10Mar 11, 2025Updated last year
- DNA Archive Simulator (DNArSim) is a memory channel model that simulate the entire DNA Data Storage process: from synthesis to basecallin…☆10Dec 6, 2021Updated 4 years ago
- Very fast ONT basecaller☆52Jun 17, 2022Updated 4 years ago
- ☆12Feb 25, 2021Updated 5 years ago
- Slide template for SUSTech sutdent☆15May 12, 2021Updated 5 years ago
- ☆21Mar 9, 2026Updated 5 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Filter fasta/fastq(.gz) files by ID and/or sequence length☆14Feb 8, 2020Updated 6 years ago
- Neural multiclass ab initio reconstruction for cryo-EM.☆13Dec 5, 2024Updated last year
- Visualise and analyse nanopore (ONT) raw signals☆131Jun 11, 2026Updated 2 months ago
- ☆13Aug 24, 2026Updated last week
- Analysis pipeline for our circSC manuscript☆14May 18, 2022Updated 4 years ago
- Yet another nanopore modification comparison tool☆12Mar 4, 2022Updated 4 years ago
- Nanopore basecalling and consensus decoding☆46Jul 22, 2022Updated 4 years ago