Alternatives and similar repositories for read_until_api

Users that are interested in read_until_api are comparing it to the libraries listed below

• nanoporetech / rerio
  Research release basecalling models and configurations
  ☆115Updated 3 months ago
• hiruna72 / squigualiser
  Visualise and analyse nanopore (ONT) raw signals
  ☆120Updated last month
• ksahlin / strobealign
  Aligns short reads using dynamic seed size with strobemers
  ☆175Updated this week
• LomanLab / mockcommunity
  Long-read mock community experiments
  ☆106Updated 3 years ago
• waveygang / wfmash
  base-accurate DNA sequence alignments using WFA and mashmap3
  ☆198Updated this week
• nanoporetech / ont-assembly-polish
  ONT assembly and Illumina polishing pipeline
  ☆89Updated 4 years ago
• medvedevgroup / SibeliaZ
  A fast whole-genome aligner based on de Bruijn graphs
  ☆153Updated last month
• yukiteruono / pbsim3
  PBSIM3: a simulator for all types of PacBio and ONT long reads
  ☆80Updated 4 months ago
• SorenKarst / longread_umi
  ☆78Updated 4 years ago
• nanoporetech / pomoxis
  Analysis components from Oxford Nanopore Research
  ☆94Updated 11 months ago
• refresh-bio / agc
  Assembled Genomes Compressor
  ☆168Updated 9 months ago
• asl / BandageNG
  a Bioinformatics Application for Navigating De novo Assembly Graphs Easily
  ☆143Updated 3 weeks ago
• ogotoh / spaln
  Genome mapping and spliced alignment of cDNA or amino acid sequences
  ☆105Updated 3 months ago
• eblerjana / pangenie
  Pangenome-based genome inference
  ☆139Updated 3 weeks ago
• KolmogorovLab / hapdup
  Pipeline to convert a haploid assembly into diploid
  ☆102Updated 7 months ago
• twolinin / longphase
  ☆116Updated last week
• thegenemyers / FASTGA
  Pairwise whole genome aligner
  ☆183Updated 3 weeks ago
• paoloshasta / shasta
  De novo assembly from Oxford Nanopore reads.
  ☆83Updated 2 months ago
• rrwick / Long-read-assembler-comparison
  Benchmarking of long-read assembly tools for bacterial whole genomes
  ☆173Updated 4 years ago
• lh3 / pangene
  Constructing a pangenome gene graph
  ☆195Updated 2 weeks ago
• eldariont / svim-asm
  Structural Variant Identification Method using Genome Assemblies
  ☆122Updated 2 years ago
• nanoporetech / pychopper
  A tool to identify, orient, trim and rescue full length cDNA reads
  ☆82Updated 3 years ago
• PacificBiosciences / trgt
  Tandem repeat genotyping and visualization from PacBio HiFi data
  ☆123Updated last month
• WGLab / NanoCaller
  Variant calling tool for long-read sequencing data
  ☆112Updated 5 months ago
• informationsea / transanno
  accurate LiftOver tool for new genome assemblies
  ☆134Updated last year
• nanoporetech / kmer_models
  Predictive kmer models for development use
  ☆59Updated 2 years ago
• xiaochuanle / NECAT
  Nanopore data assembler
  ☆160Updated 3 years ago
• nanoporetech / flappie
  Flip-flop basecaller for Oxford Nanopore reads
  ☆100Updated 3 years ago
• lh3 / yak
  Yet another k-mer analyzer
  ☆144Updated last year
• yfukasawa / LongQC
  LongQC is a tool for the data quality control of the PacBio and ONT long reads.
  ☆172Updated last year