Alternatives and similar repositories for read_until_api

Users that are interested in read_until_api are comparing it to the libraries listed below

• nanoporetech / rerio
  Research release basecalling models and configurations
  ☆116Updated 5 months ago
• hiruna72 / squigualiser
  Visualise and analyse nanopore (ONT) raw signals
  ☆124Updated 2 months ago
• LomanLab / mockcommunity
  Long-read mock community experiments
  ☆104Updated 4 years ago
• ksahlin / strobealign
  Aligns short reads using dynamic seed size with strobemers
  ☆181Updated last week
• asl / BandageNG
  a Bioinformatics Application for Navigating De novo Assembly Graphs Easily
  ☆150Updated 2 weeks ago
• medvedevgroup / SibeliaZ
  A fast whole-genome aligner based on de Bruijn graphs
  ☆153Updated 4 months ago
• nanoporetech / pomoxis
  Analysis components from Oxford Nanopore Research
  ☆96Updated last year
• KolmogorovLab / hapdup
  Pipeline to convert a haploid assembly into diploid
  ☆106Updated 9 months ago
• SorenKarst / longread_umi
  ☆79Updated 5 years ago
• waveygang / wfmash
  base-accurate DNA sequence alignments using WFA and mashmap3
  ☆208Updated last month
• rrwick / Long-read-assembler-comparison
  Benchmarking of long-read assembly tools for bacterial whole genomes
  ☆172Updated 4 years ago
• yukiteruono / pbsim3
  PBSIM3: a simulator for all types of PacBio and ONT long reads
  ☆84Updated 6 months ago
• PacificBiosciences / trgt
  Tandem repeat genotyping and visualization from PacBio HiFi data
  ☆127Updated last week
• artic-network / fieldbioinformatics
  The ARTIC fieldbioinformatics pipeline
  ☆125Updated last month
• eldariont / svim
  Structural Variant Identification Method using Long Reads
  ☆178Updated 4 years ago
• xiaochuanle / NECAT
  Nanopore data assembler
  ☆161Updated 3 years ago
• nanoporetech / ont-assembly-polish
  ONT assembly and Illumina polishing pipeline
  ☆89Updated 4 years ago
• thegenemyers / FASTGA
  Pairwise whole genome aligner
  ☆207Updated last week
• paoloshasta / shasta
  De novo assembly from Oxford Nanopore reads.
  ☆86Updated this week
• lh3 / pangene
  Constructing a pangenome gene graph
  ☆198Updated 3 months ago
• nanoporetech / qcat
  qcat is a Python command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files.
  ☆81Updated 4 years ago
• eblerjana / pangenie
  Pangenome-based genome inference
  ☆149Updated this week
• yfukasawa / LongQC
  LongQC is a tool for the data quality control of the PacBio and ONT long reads.
  ☆176Updated last year
• WGLab / NanoCaller
  Variant calling tool for long-read sequencing data
  ☆113Updated 7 months ago
• twolinin / longphase
  ☆119Updated 2 weeks ago
• eldariont / svim-asm
  Structural Variant Identification Method using Genome Assemblies
  ☆127Updated 3 years ago
• nanoporetech / kmer_models
  Predictive kmer models for development use
  ☆62Updated 2 years ago
• MBoemo / DNAscent
  Software for detecting regions of BrdU and EdU incorporation in Oxford Nanopore reads.
  ☆34Updated last month
• epi2me-labs / wf-basecalling
  ☆46Updated last month
• tobiasrausch / wally
  Wally: Visualization of aligned sequencing reads and contigs
  ☆120Updated last month