MonashBioinformaticsPlatform / polyApipeLinks
polyApipe
☆18Updated 6 months ago
Alternatives and similar repositories for polyApipe
Users that are interested in polyApipe are comparing it to the libraries listed below
Sorting:
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆25Updated last year
- ☆32Updated last year
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆18Updated last month
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆61Updated last year
- ☆35Updated 2 years ago
- DiffDomain is a statistically sound method for detecting differential TADs between conditions☆18Updated 2 months ago
- Python implementation of HiCRep stratum-adjusted correlation coefficient of Hi-C data with Cooler sparse contact matrix support☆38Updated last year
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- 🍹This repo includes the scripts and analysis notebook for the Droplet Hi-C manuscript☆14Updated 4 months ago
- ☆24Updated 4 years ago
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆54Updated 3 years ago
- ☆20Updated last year
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- Scripts for the analysis of TT-seq and DRB/TT-seq data.☆10Updated 5 years ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated 2 years ago
- Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq☆17Updated 4 months ago
- A list of alternative splicing analysis resources☆46Updated 5 months ago
- Enhanced and elegant flexible peak/loop/domain -calling and analysis tool for 1D/3D genomic data.☆47Updated 2 months ago
- ☆49Updated last year
- Estimate locus specific human LINE-1 expression.☆37Updated 2 years ago
- Tools to analyze Dip-C (or other 3C/Hi-C) data☆70Updated 9 months ago
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆29Updated 4 months ago
- Pipeline for using IDR to produce a set of peaks given two replicate eCLIP peaks☆10Updated 3 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- RADAR is devised to detect and visualize all possible twelve-types of RNA editing events from RNA-seq datasets.☆20Updated last year
- Data of genome annotation from full-stack ChromHMM model trained with 1032 datasets from 127 reference epigenomes☆37Updated last year
- a toolset for mining multi-dimensional features of the translatome with ribosome profiling data☆18Updated last month
- ☆38Updated 5 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆51Updated last year