bothlab / pomidaq
Portable Miniscope Data Acquisition
☆19Updated 2 weeks ago
Related projects: ⓘ
- Software for streaming and controlling neural and behavioral data from freely behaving animals☆116Updated 7 months ago
- ☆51Updated 3 weeks ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆96Updated 3 weeks ago
- Python code implementing the ZETA-test☆21Updated last week
- SpikeGLX recording system GUI [Neuropixels NI]☆79Updated this week
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆50Updated this week
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Updated 6 months ago
- Match suite2p ROIs between imaging sessions☆21Updated 5 years ago
- Fiber Photometry Modular Analysis Tool Suite☆32Updated 3 years ago
- A GUI and library for doing multi-fiber photometry☆17Updated 6 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆34Updated last year
- Browser-based NWB visualization and DANDI exploration☆42Updated this week
- Guided Photometry Analysis in Python, a free and open-source FP analysis tool.☆63Updated 3 weeks ago
- Histology processing☆61Updated 6 months ago
- miniscope analysis pipeline with interactive visualizations☆91Updated 2 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆65Updated this week
- ☆18Updated 7 months ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆24Updated 2 years ago
- ☆29Updated 11 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆58Updated 9 months ago
- ☆13Updated 4 years ago
- A curated list of awesome Neuropixels resources.☆68Updated 3 weeks ago
- Multi-probe trajectory planning in an intuitive 3D environment☆42Updated last week
- pynapple collaborative data analysis (high level python scripts)☆36Updated 5 months ago
- Image processing and tools for widefield imaging☆18Updated 4 years ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆61Updated 3 weeks ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆12Updated 2 months ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆52Updated last year
- Open-source stereotaxic coordinator☆14Updated last year
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆56Updated 3 months ago