Alternatives and similar repositories for pytorch_fnet:

Users that are interested in pytorch_fnet are comparing it to the libraries listed below

• spreka / biomagdsb
  This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…
  ☆52Updated 4 years ago
• vanvalenlab / deepcell-label
  Cloud-based data annotation tools for biological images
  ☆77Updated 11 months ago
• BiaPyX / BiaPy
  Open source Python library for building bioimage analysis pipelines
  ☆130Updated last week
• carpenterlab / unet4nuclei
  U-net based segmentation of nuclei in microscopy images
  ☆52Updated 6 years ago
• cytomining / DeepProfiler
  Morphological profiling using deep learning
  ☆110Updated 2 months ago
• uhlmanngroup / splinedist
  SplineDist: Automated Cell Segmentation with Spline Curves
  ☆65Updated 3 months ago
• marrlab / InstantDL
  InstantDL: An easy and convenient deep learning pipeline for image segmentation and classification
  ☆42Updated last year
• CellProfiler / tutorials
  CellProfiler tutorial pipelines and images
  ☆86Updated 2 months ago
• manuel-munoz-aguirre / PyHIST
  A pipeline to segment tissue from the background in histological images
  ☆67Updated last year
• CRBS / cdeep3m
  Please go to https://github.com/CRBS/cdeep3m2 for most recent version
  ☆58Updated 4 years ago
• instanseg / instanseg
  ☆131Updated this week
• AllenCell / aics-ml-segmentation
  ☆30Updated 2 years ago
• NHPatterson / wsireg
  multimodal whole slide image registration in a graph structure
  ☆80Updated 6 months ago
• funalab / QCANet
  Convolutional Neural Network-Based Instance Segmentation Algorithm to Acquire Quantitative Criteria of Early Mouse Development
  ☆31Updated last year
• juglab / VoidSeg
  Notebooks for VoidSeg
  ☆16Updated 4 years ago
• carpenterlab / 2016_Bray_NatureProtocols
  Supporting data files, documentation, and updated tips for the Cell Painting protocol
  ☆19Updated 3 years ago
• ysbecca / py-wsi
  Python package for dealing with whole slide images (.svs) for machine learning, particularly for fast prototyping. Includes patch samplin…
  ☆160Updated 5 months ago
• royerlab / cytoself
  Self-supervised models for encoding protein localization patterns from microscopy images
  ☆75Updated 4 months ago
• Bayer-Group / paquo
  PAthological QUpath Obsession - QuPath and Python conversations
  ☆108Updated last month
• kreshuklab / plant-seg
  A tool for cell instance aware segmentation in densely packed 3D volumetric images
  ☆104Updated last week
• MathOnco / valis
  Virtual Alignment of pathoLogy Image Series
  ☆133Updated last month
• vanvalenlab / intro-to-deepcell
  An introduction to deepcell and deep learning
  ☆144Updated 2 months ago
• BPHO-Salk / PSSR
  Deep Learning-Based Point-Scanning Super-Resolution (PSSR)
  ☆81Updated 7 months ago
• AllenCell / aics-segmentation
  Part 1 of Allen Cell and Structure Segmenter: classic image segmentation workflow
  ☆27Updated 5 months ago
• juglab / EmbedSeg
  Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images
  ☆112Updated 11 months ago
• jump-cellpainting / 2024_Chandrasekaran_NatureMethods
  ☆57Updated 2 weeks ago
• lyndonchan / hsn_v1
  HistoSegNet: Semantic Segmentation of Histological Tissue Type in Whole Slide Images (ICCV 2019)
  ☆87Updated 5 years ago
• marshuang80 / cell-segmentation
  PyTorch implementation of several neural network models for cellular image segmentation
  ☆47Updated 5 years ago
• SchmollerLab / Cell_ACDC
  A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data
  ☆141Updated this week
• gagarin37 / deep_learning_pca
  ☆23Updated 4 years ago