quantumjot / CellTrackingLinks
Cell tracking using TensorFlow and BayesianTracker
☆22Updated 3 years ago
Alternatives and similar repositories for CellTracking
Users that are interested in CellTracking are comparing it to the libraries listed below
Sorting:
- ☆24Updated 5 years ago
- AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
- AICS ML Segmentation (One-Way) Mirror☆27Updated 4 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆58Updated 4 months ago
- Guides and code for 3D nuclear instance segmentation☆22Updated last week
- ☆18Updated 2 years ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆69Updated last year
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆45Updated 7 months ago
- Track and lineage visualization with btrack and Napari☆45Updated 2 months ago
- Visualizing feature measurements on label images in napari☆10Updated last year
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆61Updated last year
- PSFj - Know your microscope fluorescence☆23Updated 5 years ago
- Microsopic Image Analyzer (MIA)☆28Updated 3 months ago
- simple package for augmentation of n-dimensional arrays☆33Updated 2 years ago
- Easily read and write ome-tiff images in python☆28Updated last year
- Image registration (alignment) software for large microscopy images☆26Updated 2 years ago
- A platform for compiling, analyzing, and exploring tracking data☆47Updated 3 months ago
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆30Updated 7 months ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆24Updated 8 months ago
- Tool for segmentation in bioimaging☆34Updated this week
- ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.☆46Updated 3 weeks ago
- Jupyter notebooks for deep lineage analysis of single-cell heterogeneity and cell cycling duration heritability.☆30Updated 5 years ago
- ilastik plugin for napari☆14Updated 2 weeks ago
- ☆15Updated 3 years ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated 2 weeks ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆34Updated 2 months ago
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆18Updated 2 months ago
- GPU-accelerated Image Processing library for Python☆52Updated last week
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆82Updated 2 weeks ago
- ☆25Updated 2 years ago