quantumjot / CellTrackingLinks
Cell tracking using TensorFlow and BayesianTracker
☆22Updated 3 years ago
Alternatives and similar repositories for CellTracking
Users that are interested in CellTracking are comparing it to the libraries listed below
Sorting:
- ☆25Updated 4 years ago
- Track and lineage visualization with btrack and Napari☆45Updated 9 months ago
- AICS ML Segmentation (One-Way) Mirror☆27Updated 4 years ago
- AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
- Visualizing feature measurements on label images in napari☆10Updated last year
- An Ilastik-like interactive pixel classifier.☆16Updated 11 months ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆43Updated 3 months ago
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated 2 weeks ago
- Guides and code for 3D nuclear instance segmentation☆22Updated last month
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆17Updated 2 weeks ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆23Updated 4 months ago
- This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…☆54Updated 4 years ago
- Image registration (alignment) software for large microscopy images☆25Updated last year
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- PSFj - Know your microscope fluorescence☆21Updated 5 years ago
- Microsopic Image Analyzer (MIA)☆28Updated last year
- SplineDist: Automated Cell Segmentation with Spline Curves☆67Updated 10 months ago
- Tool for segmentation in bioimaging☆33Updated this week
- ☆18Updated 2 years ago
- imaging demos☆9Updated 2 years ago
- ☆37Updated this week
- ☆16Updated 3 years ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated 3 weeks ago
- The repository of NEUBIAS textbook 2021☆11Updated 3 years ago
- A platform for compiling, analyzing, and exploring tracking data☆46Updated 4 months ago
- simple package for augmentation of n-dimensional arrays☆33Updated last year
- Speed up coding/extending image analysis in Python.☆35Updated last week
- ☆22Updated 4 years ago
- ☆31Updated last year
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Updated 3 years ago