quantumjot / CellTrackingLinks
Cell tracking using TensorFlow and BayesianTracker
☆22Updated 3 years ago
Alternatives and similar repositories for CellTracking
Users that are interested in CellTracking are comparing it to the libraries listed below
Sorting:
- ☆25Updated 5 years ago
- AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
- AICS ML Segmentation (One-Way) Mirror☆27Updated 4 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated last month
- simple package for augmentation of n-dimensional arrays☆33Updated 2 years ago
- Track and lineage visualization with btrack and Napari☆45Updated 10 months ago
- ☆18Updated 2 years ago
- Guides and code for 3D nuclear instance segmentation☆22Updated 2 months ago
- Visualizing feature measurements on label images in napari☆10Updated last year
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆17Updated 2 weeks ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆67Updated 10 months ago
- The repository of NEUBIAS textbook 2021☆11Updated 3 years ago
- ☆32Updated 3 weeks ago
- PSFj - Know your microscope fluorescence☆21Updated 5 years ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated 2 weeks ago
- Image registration (alignment) software for large microscopy images☆25Updated last year
- Easily read and write ome-tiff images in python☆27Updated last year
- ☆37Updated 3 weeks ago
- This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…☆55Updated 4 years ago
- ☆29Updated 7 months ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated 3 weeks ago
- Tool for segmentation in bioimaging☆35Updated this week
- ☆16Updated 3 years ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆44Updated 3 months ago
- A platform for compiling, analyzing, and exploring tracking data☆47Updated last week
- Microsopic Image Analyzer (MIA)☆28Updated last week
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆55Updated 10 months ago
- QuPath extension for Cellsparse☆19Updated 3 months ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- An Ilastik-like interactive pixel classifier.