AndrewGYork / tools
Things we use regularly
☆29Updated 7 months ago
Alternatives and similar repositories for tools:
Users that are interested in tools are comparing it to the libraries listed below
- GPU accelerated beam propagation tools for biological light tissue simulations☆35Updated 6 years ago
- Image acquisition software for mesoSPIM light-sheet microscopes.☆41Updated last week
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆27Updated 7 months ago
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆49Updated 10 months ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated last week
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆39Updated 5 months ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆64Updated this week
- Adaptive Optics plugin for MicroManager☆12Updated 2 years ago
- Automatic Correction for sCMOS-related Noise☆17Updated 3 years ago
- A collection of useful python utilities from True North Intelligent Algorithms☆33Updated this week
- GDSC Single Molecule Light Microscopy ImageJ Plugins☆16Updated this week
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆25Updated 4 years ago
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆18Updated this week
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 7 months ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆12Updated this week
- GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets☆64Updated this week
- widget for PSF simulation with aberrations☆26Updated last year
- Python bindings for MMCore, Micro-Manager's device control layer☆35Updated 2 weeks ago
- PSFj - Know your microscope fluorescence☆21Updated 5 years ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- CUDA-accelerated reconstruction for 3D-structured-illumination☆9Updated 8 months ago
- MSSR Plugin☆13Updated 5 months ago
- Acquire: a multi-camera video streaming software focusing on microscopy☆21Updated 5 months ago
- Lattice light-sheet post-processing utility.☆28Updated this week
- ☆13Updated 3 months ago
- Various parts made for fluorescence microscopy + optics work☆16Updated 5 years ago
- Pure python/C++ micro-manager ecosystem☆35Updated this week
- code of the registration and deconvolution project☆34Updated 3 years ago
- A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.☆76Updated 3 years ago
- Multiscale Image Restoration for fluorescence microscopy☆10Updated last year