AndrewGYork / tools
Things we use regularly
☆29Updated 2 months ago
Related projects ⓘ
Alternatives and complementary repositories for tools
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆25Updated 2 months ago
- GPU accelerated beam propagation tools for biological light tissue simulations☆35Updated 6 years ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆60Updated 2 weeks ago
- Image acquisition software for mesoSPIM light-sheet microscopes.☆37Updated this week
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆44Updated 6 months ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆38Updated 3 weeks ago
- A collection of useful python utilities from True North Intelligent Algorithms☆28Updated 3 weeks ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 2 months ago
- Control, reconstruction, and analysis code for oblique plane microscopy.☆21Updated 3 months ago
- Various parts made for fluorescence microscopy + optics work☆16Updated 5 years ago
- [DEPREACATED] Python interface for data-driven microscopy with Micro-manager/Micro-Magellan☆14Updated 4 years ago
- Pure python/C++ micro-manager ecosystem☆32Updated this week
- GDSC Single Molecule Light Microscopy ImageJ Plugins☆15Updated this week
- Automatic Correction for sCMOS-related Noise☆17Updated 3 years ago
- GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets☆62Updated this week
- Place to discuss the future design of a universal microscope hardware interface☆15Updated 3 years ago
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆16Updated this week
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆23Updated 4 years ago
- Dataset EXploration & Processing☆31Updated last year
- Acquire: a multi-camera video streaming software focusing on microscopy☆18Updated 3 weeks ago
- A set of Qt-based widgets onto the pymmcore-plus model☆12Updated this week
- Lattice light-sheet post-processing utility.☆27Updated 2 weeks ago
- Zernike Optimized Localization Algorithm for 3D single molecule localizations☆14Updated 2 years ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆12Updated this week
- ☆31Updated 6 months ago
- CUDA-accelerated reconstruction for 3D-structured-illumination☆9Updated 3 months ago
- ☆12Updated last month
- Microscope control software☆66Updated last year
- 3D Structured illumination microscopy (3D-SIM) reconstruction software☆28Updated last month