Morphological profiling using deep learning
☆129Sep 2, 2026Updated 2 weeks ago
Alternatives and similar repositories for DeepProfiler
Users that are interested in DeepProfiler are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Harmonize high-content image analysis tool outputs for processing with Pycytominer and other Cytomining tools.☆22Updated this week
- Python package for image-based profiling☆145Updated this week
- Single cell Morphology Quality Control (coSMicQC)☆11Sep 3, 2026Updated 2 weeks ago
- ☆72Feb 14, 2025Updated last year
- Predicting Cell Health with Morphological Profiles☆41Jan 26, 2022Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Methods for Image-Based Cell Profiling☆52May 8, 2024Updated 2 years ago
- Images and other data from the JUMP Cell Painting Consortium☆189Updated this week
- Run encapsulated docker containers with CellProfiler in the Amazon Web Services infrastructure.☆45Sep 11, 2026Updated last week
- Cell Painting Gallery☆140Sep 8, 2026Updated last week
- Cell Painting and other pipelines from the Imaging Platform☆24Jan 28, 2025Updated last year
- Supporting data files, documentation, and updated tips for the Cell Painting protocol☆22Dec 3, 2021Updated 4 years ago
- Evaluating batch correction methods for image-based cell profiling☆16Aug 11, 2025Updated last year
- Optimizing the Cell Painting assay for image-based profiling☆21Aug 11, 2025Updated last year
- Jupyter Notebooks for the Image Data Resource☆19Jun 25, 2026Updated 2 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A flexible Julia toolkit for high-dimensional cellular profiles☆13Jul 14, 2023Updated 3 years ago
- Lists and 384-well plate maps of compounds and genetic perturbations designed to assess connectivity in profiling assays☆25Jan 3, 2025Updated last year
- Community-contributed and experimental CellProfiler modules.☆77Aug 21, 2026Updated 3 weeks ago
- This repo will contain the code for training DINO models and extracting features☆17Aug 4, 2023Updated 3 years ago
- Fiji macro for cutting confocal stacks at various depths relative to surface signal☆10Sep 28, 2020Updated 5 years ago
- Compendium of tools for the Imaging Platform☆16Aug 20, 2026Updated last month
- CellProfiler tutorial pipelines and images☆104Updated this week
- ☆24Aug 27, 2020Updated 6 years ago
- Processed Cell Painting Data for the LINCS Drug Repurposing Project☆37Aug 4, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An open-source application for biological image analysis☆1,137Updated this week
- Find profile pairs and compute retrieval metrics between them.☆24Aug 28, 2026Updated 3 weeks ago
- Example CellProfiler pipelines.☆21Jul 19, 2022Updated 4 years ago
- A web application for classifying objects☆29Nov 23, 2021Updated 4 years ago
- WS-DINO: a novel framework to use weak label information in a self-supervised setting to learn phenotypic representations from high-conte…☆24Mar 28, 2023Updated 3 years ago
- A curated list of software, tools, pipelines, plugins etc. for image analysis related to biological questions.☆195Sep 1, 2026Updated 2 weeks ago
- ☆27Jan 10, 2025Updated last year
- Source code from Bray et al., (2017) A dataset of images and morphological profiles of 30,000 small-molecule treatments using the Cell Pa…