Code for In silico labeling: Predicting fluorescent labels in unlabeled images
☆265Oct 13, 2020Updated 5 years ago
Alternatives and similar repositories for in-silico-labeling
Users that are interested in in-silico-labeling are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Three dimensional cross-modal image inference☆161Oct 15, 2025Updated 10 months ago
- This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…☆55Sep 14, 2020Updated 5 years ago
- LivecellX is a comprehensive single-cell oriented deep learning live-cell analysis framework written in Python, designed specifically for…☆16Dec 10, 2025Updated 8 months ago
- An open-source application for biological image analysis☆1,135Updated this week
- Smooth 2D manifold extraction from 3D image stack☆22Mar 18, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆92Dec 17, 2023Updated 2 years ago
- Microscopy Image Cytometry Toolkit☆117Jul 15, 2022Updated 4 years ago
- ☆40Mar 11, 2020Updated 6 years ago
- Morphological profiling using deep learning☆129Aug 5, 2026Updated 3 weeks ago
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Feb 9, 2020Updated 6 years ago
- Explainable AI model of cell behavior☆20Apr 4, 2023Updated 3 years ago
- DSB2018 [ods.ai] topcoders☆418Aug 21, 2019Updated 7 years ago
- Pathologist-level interpretable whole-slide cancer diagnosis with deep learning☆131Jun 25, 2019Updated 7 years ago
- Image restoration for fluorescence microscopy☆336Dec 8, 2025Updated 8 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Deep learning pipeline for segmentation of fluorescent labels in microscopy images☆14Nov 10, 2021Updated 4 years ago
- Cell tracking using TensorFlow and BayesianTracker☆23Jan 17, 2022Updated 4 years ago
- unsupervised cell-level visual representation learning☆46Feb 20, 2019Updated 7 years ago
- Supporting data files, documentation, and updated tips for the Cell Painting protocol☆22Dec 3, 2021Updated 4 years ago
- Lists and 384-well plate maps of compounds and genetic perturbations designed to assess connectivity in profiling assays☆25Jan 3, 2025Updated last year
- Understanding sequence conservation with deep learning☆20Mar 19, 2017Updated 9 years ago
- Optical Transfer Matrix Solver with index dispersion☆28Apr 5, 2021Updated 5 years ago
- ☆62Jul 20, 2018Updated 8 years ago
- U-net based segmentation of nuclei in microscopy images☆56Sep 13, 2018Updated 7 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- H&E histopathological staining normalization☆112Jan 24, 2020Updated 6 years ago
- Biologically RElevant VIrtual Staining☆12Dec 10, 2021Updated 4 years ago
- Classification of Lung cancer slide images using deep-learning☆536Sep 24, 2024Updated last year
- Integrated Cell project implemented in pytorch☆44Oct 15, 2025Updated 10 months ago
- Code for the paper "An Improved Joint Optimization of Multiple Level Set Functions for the Segmentation of Overlapping Cervical Cells" pu…☆31Oct 31, 2016Updated 9 years ago
- Tools for tissue image stain normalisation and augmentation in Python 3☆347May 8, 2021Updated 5 years ago
- Usiigaci: stain-free cell tracking in phase contrast microscopy enabled by supervised machine learning☆206Sep 15, 2020Updated 5 years ago
- 自己项目整理的目录文件，方便查找，持续更新中☆20Jul 27, 2019Updated 7 years ago
- Methods for Image-Based Cell Profiling☆52May 8, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Community-contributed and experimental CellProfiler modules.☆77Aug 21, 2026Updated last week
- ☆51Jun 26, 2018Updated 8 years ago
- Deep Learning Library for Single Cell Analysis☆477Jun 4, 2026Updated 2 months ago
- Quantitative analysis of cell motility behaviors☆13Feb 21, 2025Updated last year
- CUDA-accelerated reconstruction for 3D-structured-illumination☆13Nov 24, 2025Updated 9 months ago
- Three-dimensional propagation and time-reversal of fluorescence images☆40Mar 25, 2019Updated 7 years ago
- CVPR 2019: Fluorescence Microscopy Denoising (FMD) dataset☆158Oct 30, 2019Updated 6 years ago