crosszamirski / Label-free-prediction-of-Cell-Painting-from-brightfield-imagesLinks
Label Free Prediction of Cell Painting from Brightfield Images
☆30Updated 2 years ago
Alternatives and similar repositories for Label-free-prediction-of-Cell-Painting-from-brightfield-images
Users that are interested in Label-free-prediction-of-Cell-Painting-from-brightfield-images are comparing it to the libraries listed below
Sorting:
- ☆62Updated 3 months ago
- Lists and 384-well plate maps of compounds and genetic perturbations designed to assess connectivity in profiling assays☆21Updated 5 months ago
- Self-supervised models for encoding protein localization patterns from microscopy images☆76Updated 8 months ago
- Self-Supervised Vision Transformers for multiplexed imaging datasets☆51Updated 11 months ago
- Official repo for Recursion's accepted spotlight paper at NeurIPS 2023 Generative AI & Biology workshop.☆59Updated 6 months ago
- computer vision models for single-cell phenotyping☆48Updated this week
- Cloud-based data annotation tools for biological images☆81Updated last year
- Cell Painting Gallery☆90Updated last week
- Python package for processing image-based profiling data☆117Updated this week
- A foundation model framework for analyzing multiplexed tissue imaging data across molecular, cellular and tissue scales enabling clinical…☆30Updated 3 months ago
- Learn morphological states of dynamic cells☆12Updated 2 years ago
- ☆32Updated 2 years ago
- Codebase for "A Foundation Model for Cell Segmentation"☆94Updated 2 weeks ago
- Supporting data files, documentation, and updated tips for the Cell Painting protocol☆21Updated 3 years ago
- ☆167Updated last month
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆56Updated last year
- Part 1 of Allen Cell and Structure Segmenter: classic image segmentation workflow☆26Updated 10 months ago
- Morphological profiling using deep learning☆117Updated 7 months ago
- Python package for deep learning based image to image transformation☆53Updated last year
- An introduction to deepcell and deep learning☆148Updated 7 months ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated 2 months ago
- ☆49Updated 3 months ago
- Base implementation of the Multi-Encoder Variational AutoEncoder (ME-VAE)☆10Updated 3 years ago
- ☆33Updated last year
- Piecewise alignment for layers of mosaics☆24Updated last week
- ☆81Updated 2 months ago
- First place algorithm in ISBI 2024 Light My Cell competition, label-free cell painting☆12Updated last year
- QuST: QuPath Extension for Integrative Whole Slide Image and Spatial Transcriptomics Analysis☆28Updated 3 weeks ago
- multimodal whole slide image registration in a graph structure☆85Updated 11 months ago
- Images and other data from the JUMP Cell Painting Consortium☆169Updated 3 months ago