crosszamirski / Label-free-prediction-of-Cell-Painting-from-brightfield-imagesLinks
Label Free Prediction of Cell Painting from Brightfield Images
☆33Updated 3 years ago
Alternatives and similar repositories for Label-free-prediction-of-Cell-Painting-from-brightfield-images
Users that are interested in Label-free-prediction-of-Cell-Painting-from-brightfield-images are comparing it to the libraries listed below
Sorting:
- ☆70Updated 11 months ago
- Self-supervised models for encoding protein localization patterns from microscopy images☆79Updated 5 months ago
- Official repo for Recursion's accepted spotlight paper at NeurIPS 2023 Generative AI & Biology workshop.☆70Updated 7 months ago
- Lists and 384-well plate maps of compounds and genetic perturbations designed to assess connectivity in profiling assays☆24Updated last year
- Python package for processing image-based profiling data☆131Updated last week
- Morphological profiling using deep learning☆123Updated last year
- Cell Painting Gallery☆120Updated last week
- computer vision models for single-cell phenotyping☆82Updated this week
- Cloud-based data annotation tools for biological images☆84Updated last year
- Self-Supervised Vision Transformers for multiplexed imaging datasets☆60Updated last year
- Base implementation of the Multi-Encoder Variational AutoEncoder (ME-VAE)☆10Updated 3 years ago
- A foundation model framework for analyzing multiplexed tissue imaging data across molecular, cellular and tissue scales enabling clinical…☆50Updated last month
- Omnipose: a high-precision solution for morphology-independent cell segmentation☆136Updated last week
- CellProfiler tutorial pipelines and images☆98Updated 2 months ago
- ☆207Updated 2 weeks ago
- An introduction to deepcell and deep learning☆155Updated last year
- ☆32Updated 5 months ago
- Three dimensional cross-modal image inference☆161Updated 3 months ago
- Images and other data from the JUMP Cell Painting Consortium☆182Updated last week
- A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data☆190Updated last week
- ☆205Updated 2 years ago
- Your Personal Assistant in Computational Bioimaging.☆45Updated 9 months ago
- Open source Python library for building bioimage analysis pipelines☆187Updated this week
- Supporting data files, documentation, and updated tips for the Cell Painting protocol☆22Updated 4 years ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆34Updated 3 months ago
- Deep Learning Library for Single Cell Analysis☆472Updated last year
- ☆29Updated last month
- Codebase for "A Foundation Model for Cell Segmentation"☆166Updated 2 months ago
- [Nature Communications] O2VAE: a model for orientation-invariant representation learning (phenotyping) in cell biology data☆36Updated 9 months ago
- Part 1 of Allen Cell and Structure Segmenter: classic image segmentation workflow☆25Updated last year