jacobkimmel / lanternfishLinks
Deep convolutional neural networks for biological motion analysis
☆14Updated 6 years ago
Alternatives and similar repositories for lanternfish
Users that are interested in lanternfish are comparing it to the libraries listed below
Sorting:
- Quantitative analysis of cell motility behaviors☆13Updated 4 months ago
- ☆25Updated 4 years ago
- Cell tracking using TensorFlow and BayesianTracker☆22Updated 3 years ago
- AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
- Analysis of results of the Data Science Bowl 2018☆21Updated 5 years ago
- Python scripts for tracking cells in fluorescent microscopy.☆11Updated 7 years ago
- Image registration (alignment) software for large microscopy images☆25Updated last year
- This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…☆54Updated 4 years ago
- Lineage Mapper Fiji plugin and MATLAB source code☆18Updated 2 years ago
- SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.☆37Updated last year
- Cell tracker designed for tracking intestinal organoids☆22Updated 2 weeks ago
- CODEX data processing code☆12Updated last week
- Self-supervised models for encoding protein localization patterns from microscopy images☆76Updated 9 months ago
- Learn morphological states of dynamic cells☆12Updated 2 years ago
- AICS ML Segmentation (One-Way) Mirror☆27Updated 4 years ago
- Automated cell tracking package for MATLAB☆11Updated 6 years ago
- imaging demos☆9Updated 2 years ago
- Organoid Localization and Quantification Using Deep Convolutional Neural Networks☆26Updated 3 years ago
- ☆18Updated 2 years ago
- Image Processing Package for the Paper "Self-organization and symmetry breaking in intestinal organoid development"☆11Updated 4 years ago
- Microscopy Image Cytometry Toolkit☆116Updated 2 years ago
- astir | Automated cell identity from single-cell multiplexed imaging and proteomics 🖥🔬✨☆53Updated this week
- simple package for augmentation of n-dimensional arrays☆32Updated last year
- A collection of resources on bioimage analysis and related tools and techniques☆13Updated 2 years ago
- Tools and scripts for EASI-FISH image data analysis☆17Updated 2 years ago
- Software for segmentation, tracking and analysis of cells in microscope image sequences.☆40Updated last year
- A self-explanatory, hands-on intro to bioimage analysis in python. Slightly outdated but still much liked by learners.☆99Updated 2 years ago
- Analysis of smFISH data☆11Updated 6 years ago
- [OBSOLETE] A collection of plugins related to the cell/nucleus tracking, motivated by the Cell Tracking Challenge.☆10Updated 3 years ago
- 3D virtual staining with 2D and 2.5D U-Nets☆29Updated last year