trasse / OpSeF-IVLinks
☆25Updated 4 years ago
Alternatives and similar repositories for OpSeF-IV
Users that are interested in OpSeF-IV are comparing it to the libraries listed below
Sorting:
- simple package for augmentation of n-dimensional arrays☆32Updated last year
- AICS ML Segmentation (One-Way) Mirror☆27Updated 4 years ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆67Updated 9 months ago
- Piecewise alignment for layers of mosaics☆25Updated last week
- ☆32Updated 2 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated 4 months ago
- QuPath extension for Cellsparse☆19Updated 2 months ago
- AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
- Cell tracking using TensorFlow and BayesianTracker☆22Updated 3 years ago
- Cloud-based data annotation tools for biological images☆81Updated last year
- Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images☆115Updated last year
- Microsopic Image Analyzer (MIA)☆29Updated last year
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆54Updated 8 months ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆43Updated 2 months ago
- AnnotatorJ: ImageJ plugin for object annotation in 2D☆25Updated 4 years ago
- ☆24Updated 2 years ago
- Track and lineage visualization with btrack and Napari☆45Updated 8 months ago
- Visualizing feature measurements on label images in napari☆10Updated 11 months ago
- Guides and code for 3D nuclear instance segmentation☆22Updated 2 weeks ago
- Lazily load multiscale whole-slide images with openslide and dask☆33Updated 2 years ago
- multimodal whole slide image registration in a graph structure☆87Updated last year
- A tool for cell instance aware segmentation in densely packed 3D volumetric images☆113Updated last week
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆17Updated 2 weeks ago
- Notebooks for VoidSeg☆16Updated 5 years ago
- ☆23Updated 2 years ago
- imaging demos☆9Updated 2 years ago
- Easily read and write ome-tiff images in python☆27Updated last year
- Image registration (alignment) software for large microscopy images☆25Updated last year
- Part 1 of Allen Cell and Structure Segmenter: classic image segmentation workflow☆26Updated 11 months ago
- GPU-accelerated image processing in QuPath☆15Updated 3 years ago