3D virtual staining with 2D and 2.5D U-Nets
☆33Jul 29, 2023Updated 2 years ago
Alternatives and similar repositories for microDL
Users that are interested in microDL are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- computer vision models for single-cell phenotyping☆97Updated this week
- Specification for the bioimage.io model description file.☆23Updated this week
- Integrated Cell project implemented in pytorch☆44Oct 15, 2025Updated 7 months ago
- Comparison of single cell normalization strategies☆11Aug 13, 2021Updated 4 years ago
- transform H&E image into CK image using GAN (virtual staining)☆12Nov 24, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Biologically RElevant VIrtual Staining☆12Dec 10, 2021Updated 4 years ago
- ☆14May 29, 2024Updated 2 years ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 5 years ago
- ☆33Jul 31, 2025Updated 10 months ago
- Analysis of results of the Data Science Bowl 2018☆22Jun 16, 2020Updated 5 years ago
- Pipeline for putting surface meshes into correspondence☆26Jan 30, 2023Updated 3 years ago
- ☆14Jan 24, 2019Updated 7 years ago
- datasets, tools, explainers, and commentary☆29Jun 3, 2026Updated last week
- ☆20Feb 27, 2013Updated 13 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Cell tracking using TensorFlow and BayesianTracker☆23Jan 17, 2022Updated 4 years ago
- This repository contains our CellTag workflow, as deployed in our 2018 Biddy et al., Nature paper.☆33Jun 24, 2024Updated last year
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated 2 months ago
- ☆24Aug 27, 2020Updated 5 years ago
- Acquire: a multi-camera video streaming software focusing on microscopy☆26Oct 30, 2024Updated last year
- Low-rank Highway Networks☆13Mar 11, 2016Updated 10 years ago
- H. Bengtsson, A Unifying Framework for Parallel and Distributed Processing in R using Futures, The R Journal, 10.32614/RJ-2021-048, 2021☆10Jan 24, 2026Updated 4 months ago
- Evaluation of Deep Learning Strategies for Nucleus Segmentation in Fluorescence Images☆14Feb 4, 2019Updated 7 years ago
- CrowdFlower API - Python client☆16Oct 5, 2017Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- a bare-bones development server for watchify☆13Aug 23, 2015Updated 10 years ago
- The repository of NEUBIAS textbook 2021☆11Jan 24, 2022Updated 4 years ago
- ☆29Aug 29, 2024Updated last year
- Computes normals for triangulated meshes☆18May 20, 2016Updated 10 years ago
- QuPath extension to interactively align images☆28Aug 7, 2025Updated 10 months ago
- simple package for augmentation of n-dimensional arrays☆34Aug 10, 2023Updated 2 years ago
- Official implementation of Ring Deconvolution Microscopy from https://www.nature.com/articles/s41592-025-02684-5☆58Oct 7, 2025Updated 8 months ago
- experiments with http://regl.party☆11Nov 22, 2016Updated 9 years ago
- A deeplearning network based on Richardson-Lucy formula☆52Mar 22, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Supplementary files for paper "Detection and removal of barcode swapping in single-cell RNAseq".☆11Jul 5, 2018Updated 7 years ago
- Analysis and Visualisation of Hydrogen/Deuterium Exchange Mass Spectrometry Data☆11Sep 3, 2025Updated 9 months ago
- Code repository for the SPIE book Optics Using Python☆21Feb 24, 2024Updated 2 years ago
- 3D shape analysis using deep learning☆31Oct 8, 2025Updated 8 months ago
- A manually curated lists of software, publications and other resources related to the analysis of HDX-MS data.☆11Dec 15, 2025Updated 5 months ago
- Take tiles from an mbtiles file locally (eg vector tiles) and extracts them to ZXY structure in an S3 bucket or locally.☆11May 19, 2020Updated 6 years ago
- Go bindings for the Jupyter protocol☆10Jan 8, 2024Updated 2 years ago