Multi-omics studies are available here
☆52Jul 3, 2022Updated 3 years ago
Alternatives and similar repositories for Hackathon
Users that are interested in Hackathon are comparing it to the libraries listed below
Sorting:
- Manubot for white paper☆13Sep 29, 2020Updated 5 years ago
- Topics In Data Science and Bioinformatics☆79Feb 15, 2024Updated 2 years ago
- ☆71May 28, 2025Updated 9 months ago
- Analyzing chromatin accessibility data in R☆18Jun 23, 2023Updated 2 years ago
- Image processing software for CODEX: driftcompensation, deconvolution, uploading and segmentation☆52May 20, 2022Updated 3 years ago
- Formalizing and benchmarking open problems in single-cell genomics☆420Nov 26, 2025Updated 3 months ago
- List of papers on deconvolution of cell types in bulk RNA-seq based on single-cell signatures☆18Aug 28, 2020Updated 5 years ago
- Single Cell multimodal data scripts for downloading datasets☆18Nov 17, 2025Updated 3 months ago
- Statistical power studies for multi-omics experiments.☆32Jan 18, 2025Updated last year
- SCelVis - web-based visualization of single-cell data. Demo☆22Mar 20, 2024Updated last year
- Cancer Suppressor Gene and Oncogene Prediction using Deep Learning (CNN)☆10Mar 7, 2018Updated 7 years ago
- ☆38Jan 21, 2026Updated last month
- Global Waddington-OT☆23Mar 25, 2025Updated 11 months ago
- ☆12May 29, 2024Updated last year
- MATLAB implementation of Gene Set Enrichment Analysis (GSEA) method for finding pathways which can show more complex relation between cha…☆10Sep 7, 2022Updated 3 years ago
- Draft cell type definitions from data - candidates for inclusion in CL☆12Jul 8, 2025Updated 7 months ago
- single nuclei RNA-seq analysis toolbox☆10Oct 26, 2016Updated 9 years ago
- Dynamical systems methods for RNA velocity analysis☆24May 19, 2021Updated 4 years ago
- Toolbox package for organizing and working with TCGA data☆28Dec 11, 2025Updated 2 months ago
- easy access to benchmark datasets☆50Aug 17, 2018Updated 7 years ago
- Software to process, statistically analyse and visualise deep mutational scanning data☆14Oct 29, 2025Updated 4 months ago
- Network inference by fusing data from diverse distributions☆14Nov 25, 2016Updated 9 years ago
- The source code and results for different methods on annotating external testing datsets of human and mouse.☆12Apr 21, 2021Updated 4 years ago
- repo to explore spatial data in R/Bioconductor and Python☆12Dec 3, 2019Updated 6 years ago
- Allen Brain Atlas utilities, parsers and data structures☆11Jun 25, 2017Updated 8 years ago
- ☆13Jan 29, 2021Updated 5 years ago
- repository for the single cell RNA-Seq workshop☆31Apr 20, 2021Updated 4 years ago
- Comparison of dimensionality reduction methods☆30Mar 24, 2020Updated 5 years ago
- Accessing AlphaMissense Data Resources in R☆13Nov 26, 2025Updated 3 months ago
- Software for in silico evolution - Paul François' group McGill University☆10Mar 16, 2022Updated 3 years ago
- A suite of scientific workflows to assess metrics to compare efficacy of protein-based tumor deconvolution algorithms.☆16Jan 15, 2024Updated 2 years ago
- XEnograft Visualization & Analysis☆11Oct 18, 2025Updated 4 months ago
- code for composite in situ imaging (cisi) analysis☆12Oct 26, 2020Updated 5 years ago
- Load bioinformatics datasets into a local database☆11Apr 8, 2025Updated 10 months ago
- Spatial omics analysis toolbox☆362Feb 12, 2026Updated 2 weeks ago
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆32Jan 28, 2026Updated last month
- Web interface for browsing, search and filtering recent biorxiv submissions☆14May 7, 2017Updated 8 years ago
- ☆12Jul 30, 2018Updated 7 years ago
- Github Repository for multiOmics Integration project involving genomics, epigenomics and transcriptomics☆13Aug 7, 2020Updated 5 years ago