BIRSBiointegration / HackathonLinks
Multi-omics studies are available here
☆52Updated 3 years ago
Alternatives and similar repositories for Hackathon
Users that are interested in Hackathon are comparing it to the libraries listed below
Sorting:
- Topics In Data Science and Bioinformatics☆79Updated last year
- Dynamic models for single-cell RNA-seq time series.☆40Updated 7 years ago
- scRNAseq integration with triplet neural networks☆41Updated 2 years ago
- Statistical approach for removing unwanted variation from multiple single-cell datasets☆67Updated last year
- Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizing high dimensional datasets☆106Updated 2 years ago
- Single-cell Hierarchical Poisson Factorization☆73Updated 3 years ago
- Quasilinear data representations for single-cell omics data analysis☆43Updated 2 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated last year
- Predicted cell-cell interactions of the aging mouse brain☆20Updated 6 years ago
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆39Updated 3 years ago
- Single-cell exploratory data analysis for RNA-Seq☆40Updated 4 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆57Updated last year
- Explore and share your scRNAseq clustering results☆50Updated 2 years ago
- Moana: Robust cell type classification of single-cell RNA-Seq data☆24Updated 6 years ago
- CAusal Reasoning for Network Identification with integer VALue programming in R☆60Updated last year
- Clone of the Bioconductor repository for the scRNAseq package.☆29Updated 8 months ago
- Bayesian MCMC matrix factorization algorithm☆69Updated 2 weeks ago
- R package for differential discovery analyses in high-dimensional cytometry data☆21Updated 7 months ago
- cytofkit: an integrated flow/mass cytometry data analysis pipeline☆58Updated 4 years ago
- A statistical simulator for rational scRNA-seq experimental design☆12Updated 4 years ago
- ☆55Updated 7 months ago
- supporting code for the multinomial single cell RNA-Seq paper☆52Updated 4 years ago
- TIDE (Tumor Immune Dysfunction and Exclusion), a gene expression biomarker to predict the clinical response to immune checkpoint blockade…☆35Updated 3 years ago
- Companion repository to Lause, Berens & Kobak (2021): "Analytic Pearson residuals for normalization of single-cell RNA-seq UMI data", Gen…☆40Updated 3 years ago
- Human transcription factor target genes from 6 databases in convenient R format.☆86Updated 7 years ago
- Pathway-Level Information Extractor (PLIER): a generative model for gene expression data☆54Updated last year
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆23Updated 6 years ago
- easy access to benchmark datasets☆50Updated 7 years ago
- Zhang, et al, Nature Immunology, 2019. Use single-cell transcriptomics and proteomics to study autoimmune diseases.☆20Updated 6 months ago
- An R/Bioconductor package that implements a single-sample molecular phenotyping approach☆45Updated last week