Alternatives and similar repositories for torch_integrated_cell

Users that are interested in torch_integrated_cell are comparing it to the libraries listed below

• AllenCellModeling / pytorch_integrated_cell
  Integrated Cell project implemented in pytorch
  ☆44Updated last month
• okraus / DeepLoc
  This repository contains the code, and access to the pretrained models and datasets for the paper: "Automated analysis of high-content mi…
  ☆50Updated 8 years ago
• psteinb / b3get
  a python module to download Broad Bioimage Benchmark Collection images
  ☆24Updated 6 years ago
• theislab / deepflow
  This code contains the neural network implementation from the nature communication manuscript NCOMMS-16-25447A.
  ☆33Updated 7 years ago
• CovertLab / DeepCell
  ☆51Updated 7 years ago
• hammerlab / cytokit
  Microscopy Image Cytometry Toolkit
  ☆114Updated 3 years ago
• pachterlab / CBP_2021
  ☆16Updated 4 years ago
• piximi / application_archived
  A web application for classifying objects
  ☆29Updated 4 years ago
• marrlab / HematoFatePrediction
  Code accompanying "Prospective identification of hematopoietic lineage choice by deep learning", Nature methods 2017, DOI:10.1038/nmeth.4…
  ☆20Updated 3 years ago
• CellProfiler / CellProfiler-plugins
  Community-contributed and experimental CellProfiler modules.
  ☆71Updated 3 weeks ago
• jmschrei / rambutan
  Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.
  ☆21Updated 7 years ago
• eiriniar / CellCnn
  Representation Learning for detection of phenotype-associated cell subsets
  ☆66Updated 5 years ago
• mehta-lab / microDL
  3D virtual staining with 2D and 2.5D U-Nets
  ☆31Updated 2 years ago
• gigascience / paper-bray2017
  Source code from Bray et al., (2017) A dataset of images and morphological profiles of 30,000 small-molecule treatments using the Cell Pa…
  ☆44Updated last year
• KlugerLab / deepcytof
  ☆18Updated 8 years ago
• cytomining / DeepProfiler
  Morphological profiling using deep learning
  ☆124Updated last year
• biocompibens / SME
  Smooth 2D manifold extraction from 3D image stack
  ☆21Updated 7 years ago
• carpenterlab / 2019_caicedo_dsb
  Analysis of results of the Data Science Bowl 2018
  ☆22Updated 5 years ago
• AllenInstitute / aics-segmentation
  AICS Segmentation (One-Way) Mirror
  ☆45Updated 4 years ago
• AllenInstitute / aics-ml-segmentation
  AICS ML Segmentation (One-Way) Mirror
  ☆27Updated 4 years ago
• piximi / piximi_old
  a free, open-source web app for annotating, training, and evaluating image understanding algorithms
  ☆25Updated 4 years ago
• weallen / STARmap
  Software for processing and analyzing STARmap experiments.
  ☆38Updated 6 years ago
• idekerlab / DCell
  DCell browser and gene deletion simulator
  ☆124Updated 2 years ago
• carpenterlab / unet4nuclei
  U-net based segmentation of nuclei in microscopy images
  ☆52Updated 7 years ago
• AllenCellModeling / pytorch_fnet
  Three dimensional cross-modal image inference
  ☆160Updated last month
• kundajelab / cs273b
  CS273B Deep Learning for Genomics Course Materials
  ☆34Updated 5 years ago
• berenslab / rna-seq-tsne
  The art of using t-SNE for single-cell transcriptomics
  ☆129Updated last year
• BigNeuron / BigNeuron-Wiki
  Documentations of BigNeuron Project progress
  ☆24Updated 9 years ago
• wenjiegroup / BiRen
  ☆13Updated 6 years ago
• KrishnaswamyLab / SAUCIE
  ☆101Updated last year