☆46Oct 15, 2025Updated 4 months ago
Alternatives and similar repositories for torch_integrated_cell
Users that are interested in torch_integrated_cell are comparing it to the libraries listed below
Sorting:
- Integrated Cell project implemented in pytorch☆44Oct 15, 2025Updated 4 months ago
- Three dimensional cross-modal image inference☆161Oct 15, 2025Updated 4 months ago
- Analysis of results of the Data Science Bowl 2018☆22Jun 16, 2020Updated 5 years ago
- ☆16Updated this week
- Software for learning sparse Bayesian networks☆42Sep 5, 2020Updated 5 years ago
- A simple Python project that takes a CT scan in DICOM format and outputs a directional X-ray projection.☆11Jun 13, 2019Updated 6 years ago
- Variational autoencoder (VAE) for image analysis, built in keras☆11Jul 21, 2022Updated 3 years ago
- Shepherd: accurate clustering for correcting DNA barcode errors: https://doi.org/10.1093/bioinformatics/btac395☆11Nov 13, 2023Updated 2 years ago
- ☆10Nov 5, 2016Updated 9 years ago
- AICS ML Segmentation (One-Way) Mirror☆27May 2, 2021Updated 4 years ago
- ☆51Jun 26, 2018Updated 7 years ago
- ☆15May 2, 2021Updated 4 years ago
- Code accompanying paper "Set Norm and Equivariant Skip Connections: Putting the Deep in Deep Sets."☆30Oct 11, 2022Updated 3 years ago
- Graph matching of brain connectivity networks based on graph edit distance☆13May 25, 2017Updated 8 years ago
- Deep convolutional neural networks for biological motion analysis☆14Jan 26, 2019Updated 7 years ago
- Jupyter notebooks for CellProfiler and friends☆14Mar 23, 2018Updated 7 years ago
- simple package for augmentation of n-dimensional arrays☆34Aug 10, 2023Updated 2 years ago
- ☆15Jul 29, 2022Updated 3 years ago
- End-to-end PSF extraction for 3D microscopy☆16Jun 16, 2020Updated 5 years ago
- To be a next-generation DL-based phenotype prediction from genome mutations.☆18May 17, 2021Updated 4 years ago
- AICS Segmentation (One-Way) Mirror☆45Dec 16, 2020Updated 5 years ago
- Code accompanying "Prospective identification of hematopoietic lineage choice by deep learning", Nature methods 2017, DOI:10.1038/nmeth.4…☆20Dec 18, 2025Updated 2 months ago
- Understanding sequence conservation with deep learning☆20Mar 19, 2017Updated 8 years ago
- 8th place solution for SIIM-ACR Pneumothorax Segmentation competition on Kaggle☆22Dec 24, 2021Updated 4 years ago
- Deep learning model for single-cell inference of multi-omic profiles from a single input modality.☆47Jul 17, 2023Updated 2 years ago
- Tutorial for using the perturbseq library to load and manipulate experiments☆24Aug 7, 2019Updated 6 years ago
- Code for Universal Single-Cell Matching with Unpaired Feature Sets☆22Jun 7, 2021Updated 4 years ago
- U-net based segmentation of nuclei in microscopy images☆54Sep 13, 2018Updated 7 years ago
- A visualization toolkit coordinating with Sushi and Tempura☆26Apr 4, 2016Updated 9 years ago
- Starter code for the CellSignal NeurIPS 2019 competition.☆45Jun 6, 2025Updated 8 months ago
- This repository contains the code, and access to the pretrained models and datasets for the paper: "Automated analysis of high-content mi…☆50Apr 30, 2017Updated 8 years ago
- Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.☆21Aug 7, 2018Updated 7 years ago
- ☆26May 9, 2022Updated 3 years ago
- Dynamical systems methods for RNA velocity analysis☆24May 19, 2021Updated 4 years ago
- ☆24Aug 27, 2020Updated 5 years ago
- 3D virtual staining with 2D and 2.5D U-Nets☆31Jul 29, 2023Updated 2 years ago
- Learn single-cell dynamics using neural differential equations☆62Jan 6, 2026Updated last month
- Deep Learning package for Python☆25Apr 5, 2018Updated 7 years ago
- Pytorch implementation of 'Semi-Implicit Methods for Deep Neural Networks'☆25May 13, 2019Updated 6 years ago