stardist / augmendLinks
simple package for augmentation of n-dimensional arrays
☆33Updated 2 years ago
Alternatives and similar repositories for augmend
Users that are interested in augmend are comparing it to the libraries listed below
Sorting:
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated last month
- ☆25Updated 5 years ago
- 3D Extension of the Cellpose Algorithm by Stringer et al., 2021.☆35Updated 2 years ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆67Updated 11 months ago
- ☆32Updated 3 weeks ago
- Python package for deep learning based image to image transformation☆53Updated last week
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 6 months ago
- MorphoFeatures code and data☆21Updated 2 years ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆55Updated 10 months ago
- Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeve…☆22Updated 2 years ago
- Utils and convenience functions for large-scale bio-image analysis.☆57Updated 3 weeks ago
- 3D shape analysis using deep learning☆26Updated last year
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆44Updated 3 months ago
- ☆31Updated 4 years ago
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 5 years ago
- Optimize image processing workflows in napari☆18Updated 3 months ago
- Process images using SimpleITK in napari☆21Updated 3 months ago
- GPU-accelerated image processing in QuPath☆15Updated 3 years ago
- ☆13Updated 6 months ago
- StarDist plugin for napari☆39Updated last year
- Visualizing feature measurements on label images in napari☆10Updated last year
- Lazily load multiscale whole-slide images with openslide and dask☆33Updated 2 years ago
- GPU-accelerated general purpose image processing and image analysis in napari☆35Updated 3 months ago
- Notebooks for VoidSeg☆17Updated 5 years ago
- Python module for registering and fusing multi-view microscopy data