waldronlab / HGNChelperLinks
Identify and correct invalid gene symbols
☆60Updated 11 months ago
Alternatives and similar repositories for HGNChelper
Users that are interested in HGNChelper are comparing it to the libraries listed below
Sorting:
- scDataviz: single cell dataviz and downstream analyses☆64Updated 4 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- A General Framework for Consensus Partitioning☆63Updated 9 months ago
- An r package that works as a wrapper to homologene☆46Updated 2 years ago
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆38Updated 3 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆47Updated 2 years ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆24Updated 4 months ago
- An R/Bioconductor package that implements a single-sample molecular phenotyping approach☆45Updated last month
- Toolkit for Single-Cell Velocity☆58Updated 4 months ago
- An R package to analyze single-cell V(D)J data☆28Updated 2 years ago
- Clone of the Bioconductor repository for the batchelor package.☆18Updated 8 months ago
- Normalize CITEseq Data☆66Updated this week
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆22Updated 2 years ago
- ☆55Updated 4 years ago
- ☆43Updated 4 years ago
- ☆41Updated 7 years ago
- Toolbox with R scripts☆38Updated 7 years ago
- ☆41Updated 3 years ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆55Updated 4 years ago
- Reference transcriptome indices build from kallisto for popular organisms☆44Updated last year
- R package to visualize scRNA sequencing data.☆20Updated 3 years ago
- R package for Flexible dot plots☆29Updated 3 years ago
- Molecular Signatures Database (MSigDB) in a tidy data frame☆26Updated 3 months ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆47Updated last month
- A R framework for pipeline benchmarking, with application to single-cell RNAseq☆42Updated 4 years ago
- This package contains a reference-based function to infer the proportions of a priori known cell subtypes present in a sample representin…☆53Updated 3 months ago
- Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.☆92Updated 10 months ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆39Updated 3 years ago