MATLAB toolbox for spike-train community detection
☆15Feb 12, 2024Updated 2 years ago
Alternatives and similar repositories for SpikeTrainCommunitiesToolBox
Users that are interested in SpikeTrainCommunitiesToolBox are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code published with the paper J. Mölter, L. Avitan, and G. J. Goodhill. "Detecting neural assemblies in calcium imaging data". BMC Biolog…☆11Apr 30, 2019Updated 7 years ago
- Extracting neuronal functional network dynamics via adaptive Granger causality analysis☆19Mar 29, 2018Updated 8 years ago
- A spike raster plot from spike time stamps with optional trial and group data.☆12Nov 15, 2024Updated last year
- Matlab code for interacting with the Open Ephys GUI☆21Sep 25, 2024Updated last year
- A MATLAB toolbox for running behavioral neuroscience experiments and managing data☆33May 28, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆22Jul 22, 2019Updated 6 years ago
- Spike-sorting and validation metric codes in MATLAB and C☆12Jan 11, 2017Updated 9 years ago
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆33Sep 14, 2023Updated 2 years ago
- MountainLab is data processing, sharing and visualization software for scientists. It is built around MountainSort, spike sorting softwar…☆46Apr 30, 2019Updated 7 years ago
- an open source multi-threaded eye tracker☆29Oct 9, 2020Updated 5 years ago
- Python package for computing partial information decomposition.☆13Mar 15, 2019Updated 7 years ago
- Simple Matlab code to fit reinforcement learning models to choice data☆18Jun 10, 2019Updated 7 years ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆28Dec 21, 2023Updated 2 years ago
- A matlab package for analyzing chaotic properties of time series data☆11Jun 29, 2018Updated 7 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A set of graph/networks analysis functions in Octave. This fork focuses on MATLAB compatibility.☆47Mar 26, 2014Updated 12 years ago
- sync2brain's bossdevice RESEARCH Application Programmable Interface (API) for MATLAB☆14May 17, 2026Updated 3 weeks ago
- Sample implementation of the MotionMapper behavioral analysis algorithms☆82Sep 8, 2020Updated 5 years ago
- spike extraction from calcium signals (Deneux et al., 2016)☆36Apr 9, 2020Updated 6 years ago
- a visualization method for neural data☆252Apr 4, 2025Updated last year
- P-sort is an open-source, Python-based, cross-platform software with an intuitive GUI. It has been designed to address the challenges of …☆11Jan 23, 2024Updated 2 years ago
- This repository contains the MATLAB code for the technical article "Developing MATLAB Apps Using the Model-View-Controller Pattern."☆16Jun 3, 2026Updated last week
- cortex lab code for electrophysiology☆84Feb 5, 2024Updated 2 years ago
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆12May 28, 2026Updated 2 weeks ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- A mouse brain histology tool for neuroscientists.☆13Feb 16, 2026Updated 3 months ago
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆73May 12, 2020Updated 6 years ago
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆43Jul 23, 2019Updated 6 years ago
- For managing 2P imaging datasets from preprocessing to activity trace extraction☆10Apr 12, 2019Updated 7 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆101Nov 14, 2024Updated last year
- Official Implementation of "Learning Disentangled Behavior Embeddings"☆14Nov 18, 2021Updated 4 years ago
- A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…☆35Oct 6, 2023Updated 2 years ago
- Repo for CCN workshop on caiman and mesmerize in January 2023☆12Mar 3, 2023Updated 3 years ago
- matlab code for 3D skeleton action recognition☆15May 11, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆13Aug 7, 2020Updated 5 years ago
- Detect synchronous and overlapped spikes in extracellular recordings using Binary Pursuit (Pillow et al 2013)☆12Jan 14, 2015Updated 11 years ago
- Voltage imaging analysis in python☆10May 25, 2021Updated 5 years ago
- Implementation of Recurrent Hidden Semi-Markov Model http://www.cc.gatech.edu/~lsong/papers/DaiDaiZhaLietal17.pdf☆12Mar 31, 2019Updated 7 years ago
- Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)☆51Dec 17, 2021Updated 4 years ago
- ☆18May 27, 2026Updated 2 weeks ago
- DataJoint Element for multi-photon calcium imaging analysis with CaImAn, Suite2p, and EXTRACT☆15May 20, 2025Updated last year