mdhumphries / SpikeTrainCommunitiesToolBox

Related projects ⓘ

Alternatives and complementary repositories for SpikeTrainCommunitiesToolBox

• NeurodataWithoutBorders / matnwb
  A Matlab interface for reading and writing NWB files
  ☆49Updated this week
• GiocomoLab / ln-model-of-mec-neurons
  Code implements the LN model used to describe spike trains of MEC neurons based on the animal's position, head direction, speed, and thet…
  ☆21Updated 2 years ago
• EnnyvanBeest / UnitMatch
  Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
  ☆41Updated this week
• djoshea / neuropixel-utils
  Utilities for managing Neuropixel datasets and Kilosort results
  ☆45Updated last year
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆67Updated last month
• cortex-lab / sortingQuality
  Functions to assess quality of spike sorting results
  ☆31Updated last year
• int-brain-lab / iblapps
  pyqt5 dependent applications for IBL sessions
  ☆25Updated this week
• SjulsonLab / methods_class
  "Approaches to Study Neural Circuits" course
  ☆63Updated 3 years ago
• buzsakilab / 3d_print_designs
  ☆13Updated 6 months ago
• BarbourLab / lussac
  Package for automatic post-processing and merging of multiple spike-sorting analyses.
  ☆24Updated 4 months ago
• JaneliaSciComp / JRCLUST
  JRCLUST
  ☆34Updated 6 months ago
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆50Updated last year
• cortex-lab / spikes
  cortex lab code for electrophysiology
  ☆74Updated 9 months ago
• pillowlab / neuroGLM
  Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).
  ☆68Updated 4 years ago
• open-ephys / analysis-tools
  Archived code for reading data saved by the Open Ephys GUI
  ☆59Updated last year
• PeyracheLab / Tutorial_HDPlaceCells_Analysis
  A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.
  ☆14Updated 6 years ago
• jenniferColonell / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆54Updated last week
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆61Updated this week
• Julie-Fabre / awesome_neuropixels
  A curated list of awesome Neuropixels resources.
  ☆75Updated 2 weeks ago
• SpikeInterface / spiketoolkit
  Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.
  ☆49Updated 2 years ago
• Coen-Lab / chronic-neuropixels
  CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation
  ☆17Updated this week
• ransona / ROIMatchPub
  Match suite2p ROIs between imaging sessions
  ☆23Updated 5 years ago
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆112Updated last month
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆43Updated 5 years ago
• adredish / MClust-Spike-Sorting-Toolbox
  MClust is a Matlab-based spike sorting toolbox for the separation of putative cells from multi-site neurophysiological recordings. It is…
  ☆14Updated 2 years ago
• magland / sortingview
  Web app for viewing results of ephys spike sorting
  ☆25Updated 3 months ago
• nelpy / nelpy
  Neuroelectrophysiology object model and data analysis in Python.
  ☆47Updated last week
• buzsakilab / buzcode
  Code for internal lab sharing - polishing has started but is by no means complete
  ☆119Updated 11 months ago
• INM-6 / viziphant
  Visualization of electrophysiological data from Elephant
  ☆22Updated 2 weeks ago
• PeyracheLab / pynacollada
  pynapple collaborative data analysis (high level python scripts)
  ☆37Updated 7 months ago