hochbaumGroup / HNCcorrLinks
HNCcorr algorithm for neuron identification in calcium imaging datasets.
☆12Updated 2 years ago
Alternatives and similar repositories for HNCcorr
Users that are interested in HNCcorr are comparing it to the libraries listed below
Sorting:
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Updated 2 weeks ago
- motion correction☆17Updated 2 years ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆54Updated last year
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆33Updated 2 years ago
- ☆20Updated 7 years ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 7 years ago
- Calcium Data Extraction and Analysis☆48Updated 3 years ago
- ☆41Updated 4 years ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- https://nutil.readthedocs.io/en/latest/☆13Updated 3 weeks ago
- This toolbox includes routines for using principal component analysis (PCA) and independent component analysis (ICA) to extract cellular …☆26Updated 7 years ago
- ☆17Updated 2 years ago
- Z-Brain Viewer and Analysis Scripts for MAP-Mapping☆24Updated 7 months ago
- Activity Quantification and Analysis for molecular spatiotemporal signals☆30Updated this week
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- spike extraction from calcium signals (Deneux et al., 2016)☆32Updated 5 years ago
- ☆34Updated 6 months ago
- Tools for working with single-neuron morphological reconstructions☆22Updated last year
- Deconvolution of calcium imaging data☆101Updated 10 months ago
- IaC codebase for the NeuroCAAS Platform☆39Updated last year
- A curated list of awesome Janelia software☆17Updated 9 months ago
- MATLAB analysis functions for Miniscope project.☆19Updated 8 years ago
- Blazing fast calcium imaging analysis toolbox☆22Updated 8 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year
- Tools for processing 2P recordings☆130Updated 2 years ago
- Analysis package for miniscope data☆14Updated 3 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆55Updated 2 years ago
- Region Of Interest Classification and Tracking☆27Updated this week
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆55Updated this week
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago