epnev / constrained-foopsiLinks
Implementation of the constrained deconvolution spike inference algorithm in Matlab
☆13Updated 10 years ago
Alternatives and similar repositories for constrained-foopsi
Users that are interested in constrained-foopsi are comparing it to the libraries listed below
Sorting:
- course materials for the 2017 Summer Workshop on the Dynamic Brain☆12Updated 8 years ago
- The code takes as an input a time series vector of calcium observationsand produces samples from the posterior distribution of the underl…☆20Updated 9 years ago
- Introductory workshop to modeling and model fitting in psychophysics and neuroscience☆11Updated 6 years ago
- Python implementation of fast-oopsi, smc-oopsi, wiener, and discretize with binning☆15Updated 3 years ago
- An ongoing collection of ipython notebooks on neuroscience from xcorr: computational neuroscience.☆78Updated 3 years ago
- cli for downloading data from crcns.org☆32Updated 2 years ago
- Interpretable neural spike train models with fully-Bayesian inference algorithms☆48Updated 7 years ago
- Preprint classes for biological journals☆31Updated 5 years ago
- Train excitatory-inhibitory recurrent neural networks for cognitive tasks.☆55Updated 9 years ago
- Tools for spike data analysis and visualization☆111Updated 2 years ago
- Implementation of Phase Coupling Estimation in Python and Matlab (see http://arxiv.org/abs/0906.3844 )☆16Updated 11 years ago
- Recordings of 10k neurons during spontaneous behaviors☆54Updated last year
- introductory material☆18Updated 10 years ago
- a repository containing everything relevant to our fast non-negative deconvolution work☆35Updated 9 years ago
- Neuroproc dataset descriptions and dictionaries☆16Updated 9 years ago
- Matlab code for Topographic Latent Source Analysis of brain imaging data☆15Updated 9 years ago
- a Python machine learning library for neurophysiology data☆36Updated 7 years ago
- code for Cunningham and Ghahramani (2015), Journal of Machine Learning Research☆28Updated 9 years ago
- A workshop for teaching python to neuroscientists with some previous programming experience.☆35Updated 9 years ago
- Exercises for 2015 Berkeley practical neuroimaging class☆26Updated 10 years ago
- A toolbox for inferring spikes from calcium traces.☆23Updated 2 years ago
- Dimensionality reduction of spikes trains☆49Updated 4 years ago
- BlueBrain's recipe writer to parameterize structure and logic of a mouse whole-neocortex connectome☆10Updated 3 years ago
- Generalized linear models for neural spike train modeling, in Python! With GPU-accelerated fully-Bayesian inference, MAP inference, and n…☆45Updated 11 years ago
- Code for the myconnectome project☆35Updated last month
- LaTex code for creating my CV☆11Updated 6 years ago
- Numerical solver for coupled population density equations☆25Updated 2 years ago
- Preprocessing and analysis scripts for the dPCA paper (eLife 2016)☆10Updated 9 years ago
- Responses of 10,000 neurons to 2,800 natural images☆72Updated 6 years ago
- Bayesian mixed-effects modeling of fMRI data in Python☆39Updated 4 years ago