epnev / constrained-foopsiLinks
Implementation of the constrained deconvolution spike inference algorithm in Matlab
☆13Updated 9 years ago
Alternatives and similar repositories for constrained-foopsi
Users that are interested in constrained-foopsi are comparing it to the libraries listed below
Sorting:
- The code takes as an input a time series vector of calcium observationsand produces samples from the posterior distribution of the underl…☆20Updated 8 years ago
- course materials for the 2017 Summer Workshop on the Dynamic Brain☆11Updated 7 years ago
- Python implementation of fast-oopsi, smc-oopsi, wiener, and discretize with binning☆15Updated 3 years ago
- Interpretable neural spike train models with fully-Bayesian inference algorithms☆48Updated 7 years ago
- Introductory workshop to modeling and model fitting in psychophysics and neuroscience☆11Updated 6 years ago
- Preprint classes for biological journals☆30Updated 4 years ago
- a repository containing everything relevant to our fast non-negative deconvolution work☆35Updated 8 years ago
- Recordings of 10k neurons during spontaneous behaviors☆54Updated last year
- Python tools for analysis of neurophysiology data☆37Updated 2 years ago
- Basic integration for Slack notifications for Matlab.☆21Updated 10 years ago
- LaTex code for creating my CV☆11Updated 6 years ago
- Neuroproc dataset descriptions and dictionaries☆16Updated 8 years ago
- Train excitatory-inhibitory recurrent neural networks for cognitive tasks.☆50Updated 9 years ago
- Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood☆19Updated 7 years ago
- introductory material☆18Updated 9 years ago
- python package for operant conditioning☆14Updated last year
- BlueBrain's recipe writer to parameterize structure and logic of a mouse whole-neocortex connectome☆10Updated 3 years ago
- A toolbox for inferring spikes from calcium traces.☆23Updated 2 years ago
- An ongoing collection of ipython notebooks on neuroscience from xcorr: computational neuroscience.☆78Updated 3 years ago
- Matlab code for Topographic Latent Source Analysis of brain imaging data☆15Updated 9 years ago
- Tools for spike data analysis and visualization☆108Updated 2 years ago
- cli for downloading data from crcns.org☆31Updated last year
- a Python machine learning library for neurophysiology data☆36Updated 6 years ago
- Topological data analysis tools for cross correlation matrices☆38Updated 2 years ago
- A class for using ML algorithms for spike prediction☆61Updated 7 years ago
- Statistics for high-dimensional data (homogeneity, sphericity, independence, spherical uniformity)☆19Updated last year
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆33Updated 2 years ago
- Numerical solver for coupled population density equations☆25Updated 2 years ago
- This repository contains code used for the fly brain activity experiments☆18Updated 2 years ago
- Datasets☆26Updated 10 years ago