KordingLab / nerds
Matlab package implementing blind deconvolution method for neural spike recovery
☆14Updated 8 years ago
Alternatives and similar repositories for nerds:
Users that are interested in nerds are comparing it to the libraries listed below
- A class for using ML algorithms for spike prediction☆59Updated 7 years ago
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆38Updated 6 months ago
- Deconvolution of calcium imaging data☆86Updated 3 weeks ago
- a Python machine learning library for neurophysiology data☆36Updated 6 years ago
- Tools for spike data analysis and visualization☆104Updated 2 years ago
- Course materials for the 2018 Summer Workshop on the Dynamic Brain☆22Updated 6 years ago
- Recordings of 10k neurons during spontaneous behaviors☆50Updated 10 months ago
- ☆9Updated 4 years ago
- ☆34Updated 3 years ago
- Fast Exact Spike Inference Via L0 Optimization☆15Updated 4 years ago
- Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood☆19Updated 7 years ago
- CorBinian: A toolbox for modelling and simulating high-dimensional binary and count-data with correlations☆19Updated 3 years ago
- Train excitatory-inhibitory recurrent neural networks for cognitive tasks.☆49Updated 8 years ago
- Fast software for high-dimensional cluster analysis using the masked EM algorithm for Gaussians mixtures☆32Updated 5 years ago
- Pytorch implementation of LocaNMF☆34Updated 5 years ago
- Pytorch implementation of LFADS for demo at CAN workshop☆19Updated 5 years ago
- A quickstart guide to tensor decomposition☆69Updated 2 years ago
- Spike-sorting and validation metric codes in MATLAB and C☆12Updated 8 years ago
- latent manifold tuning model / P-GPLVM☆12Updated 5 years ago
- Detect synchronous and overlapped spikes in extracellular recordings using Binary Pursuit (Pillow et al 2013)☆12Updated 10 years ago
- Main repository for IBL rig code☆21Updated this week
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆32Updated last year
- Interpretable neural spike train models with fully-Bayesian inference algorithms☆47Updated 6 years ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 6 years ago
- Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)☆49Updated 3 years ago
- InVivoTools a set of neurophysiology tools, forked from VanHooserTools, containing tools for visual stimulation and analysis of calcium i…☆14Updated this week
- Dimensionality reduction of calcium-imaged neuronal population activity☆14Updated 2 years ago
- Some python functions to supplement the NEURON python module☆28Updated 5 years ago
- ☆26Updated 7 months ago
- Python tools for analysis of neurophysiology data☆36Updated last year