Alternatives and similar repositories for nerds:

Users that are interested in nerds are comparing it to the libraries listed below

• KordingLab / spykesML
  A class for using ML algorithms for spike prediction
  ☆60Updated 7 years ago
• int-brain-lab / mtscomp
  Multichannel time series lossless compression in pure Python based on NumPy and zlib
  ☆39Updated last month
• KordingLab / spykes
  Tools for spike data analysis and visualization
  ☆104Updated 2 years ago
• AllenInstitute / neuroglia
  a Python machine learning library for neurophysiology data
  ☆36Updated 6 years ago
• j-friedrich / OASIS
  Deconvolution of calcium imaging data
  ☆93Updated 3 months ago
• ahwillia / tensor-demo
  A quickstart guide to tensor decomposition
  ☆70Updated 2 years ago
• flatironinstitute / spikeforest_old
  SpikeForest -- spike sorting analysis for website
  ☆16Updated 4 years ago
• ahwillia / PyNeuron-Toolbox
  Some python functions to supplement the NEURON python module
  ☆29Updated 5 years ago
• kwikteam / klustakwik2
  Fast software for high-dimensional cluster analysis using the masked EM algorithm for Gaussians mixtures
  ☆31Updated 5 years ago
• pillowlab / BinaryPursuitSpikeSorting
  Detect synchronous and overlapped spikes in extracellular recordings using Binary Pursuit (Pillow et al 2013)
  ☆12Updated 10 years ago
• mukamel-lab / CellSort
  This toolbox includes routines for using principal component analysis (PCA) and independent component analysis (ICA) to extract cellular …
  ☆26Updated 6 years ago
• flatironinstitute / online_psp_matlab
  Benchmark of online PCA algorithms
  ☆22Updated 6 years ago
• int-brain-lab / iblrig
  Main repository for IBL rig code
  ☆22Updated last week
• jewellsean / FastLZeroSpikeInference
  Fast Exact Spike Inference Via L0 Optimization
  ☆15Updated 4 years ago
• ikinsella / trefide
  Trend Filter Denoising
  ☆21Updated 3 years ago
• kylerbrown / python-for-neuroscience
  A workshop for teaching python to neuroscientists with some previous programming experience.
  ☆35Updated 9 years ago
• sg-s / crabsort
  🦀🦀🦀 Sort spikes from extra-cellular recordings using neural networks. Fully automated.
  ☆19Updated 2 years ago
• project-improv / improv
  Adaptive Platform for Neuroscience Experiments
  ☆40Updated 2 months ago
• zebrain-lab / Toolbox-Romano-et-al
  Computational toolbox for analysis of calcium imaging data of neuronal populations
  ☆32Updated last year
• flatironinstitute / ironclust
  Spike sorting software being developed at Flatiron Institute, based on JRCLUST (Janelia Rocket Cluster)
  ☆28Updated 2 years ago
• lacerbi / workshop-bristol-2019
  Introductory workshop to modeling and model fitting in psychophysics and neuroscience
  ☆11Updated 6 years ago
• MouseLand / stringer-pachitariu-et-al-2018a
  Recordings of 10k neurons during spontaneous behaviors
  ☆51Updated last year
• lyprince / lfads_demo
  Pytorch implementation of LFADS for demo at CAN workshop
  ☆19Updated 5 years ago
• paninski-lab / yass
  YASS: Yet Another Spike Sorter
  ☆66Updated 2 years ago
• NeuralEnsemble / NeuroTools
  NeuroTools is a collection of tools for representing and anlyzing neuroscientific data.
  ☆32Updated 5 years ago
• frsong / pycog
  Train excitatory-inhibitory recurrent neural networks for cognitive tasks.
  ☆49Updated 9 years ago
• nicodjimenez / fit_neuron
  A neuroscience python package for the estimation and evaluation of neural models from patch clamp neural recordings, including a library …
  ☆18Updated 9 years ago
• liubenyuan / py-oopsi
  Python implementation of fast-oopsi, smc-oopsi, wiener, and discretize with binning
  ☆14Updated 2 years ago
• ganguli-lab / twpca
  🕝 Time-warped principal components analysis (twPCA)
  ☆126Updated 4 years ago
• MouseLand / EnsemblePursuit
  ☆9Updated 4 years ago