VIPER (Variant InsPector and Expert Rating tool) can be utilised to view variant calls and decide whether or not those are true or false positives.
☆16Jan 17, 2022Updated 4 years ago
Alternatives and similar repositories for viper
Users that are interested in viper are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pipeline for structural variant image curation and analysis.☆49Dec 5, 2021Updated 4 years ago
- Upscaling SV detection to a multi-population level.☆22Jul 28, 2025Updated last year
- Gene lists related to cancer immunotherapy☆14Sep 11, 2024Updated last year
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Jun 13, 2026Updated 2 months ago
- Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data☆13Apr 18, 2019Updated 7 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Python package and routines for merging VCF files☆29Apr 1, 2021Updated 5 years ago
- Ethnicity Annotation from Whole-Exome and Targeted Sequencing Data☆20Mar 18, 2023Updated 3 years ago
- An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions☆15Mar 4, 2025Updated last year
- Haplotype-based somatic genome simulator☆10Apr 20, 2026Updated 4 months ago
- ☆13May 2, 2018Updated 8 years ago
- Detects human contamination in bam files☆16Sep 10, 2020Updated 5 years ago
- Core consonance utilities for scheduling, reporting on, and provisioning VMs for workflows☆14Jun 27, 2018Updated 8 years ago
- ☆13Jun 21, 2017Updated 9 years ago
- [DEPRECATED] - A GA4GH Task Execution Service (TES) compatible implementation for Azure Compute☆18Sep 29, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Barcoded Molecular Families☆22Nov 20, 2017Updated 8 years ago
- Unfazed by genomic variant phasing☆29May 26, 2024Updated 2 years ago
- Generate and process BAM files from Illumina sequencing instrument files☆23Feb 25, 2016Updated 10 years ago
- Machine Learning to Detect Cancer Biomarkers from RNAseq Data☆36Aug 9, 2019Updated 7 years ago
- PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a …☆13Dec 12, 2024Updated last year
- A Java package for non-invasive cancer diagnosis using methylation profiles of cell-Free DNA.☆17Apr 2, 2019Updated 7 years ago
- Polygenic score calculation from VCF in Nim.☆15Nov 22, 2020Updated 5 years ago
- ☆27Jul 28, 2016Updated 10 years ago
- xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from …☆11Oct 21, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- As part of the COVID-19 Host Genetics Global initative, this repo serves to corroborate sample scripts for sequencing QC.☆12Jul 30, 2020Updated 6 years ago
- Structural Variation breakpoint discovery via adaptive learning☆17Jul 6, 2023Updated 3 years ago
- Filtering and profiling of next-generational sequencing data using region-specific rules☆25May 17, 2016Updated 10 years ago
- APIs for discovering genomics tools, their metadata and their containers☆35Mar 28, 2026Updated 5 months ago
- Concordance and contamination estimator for tumor–normal pairs☆60Oct 22, 2024Updated last year
- Client side iobio library for building and executing iobio commands☆10Dec 31, 2018Updated 7 years ago
- A needle plot for mutation data☆27Aug 31, 2017Updated 9 years ago
- ☆37Jul 28, 2019Updated 7 years ago
- B73Ab10 genome assembly methods☆17Jan 21, 2022Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆13Jun 7, 2024Updated 2 years ago
- A shiny application to visualize MCscan result☆37Jun 26, 2026Updated 2 months ago
- amplicon/smMIP mapping and analysis pipeline☆11Dec 8, 2022Updated 3 years ago
- Bioinformatics pipelines for Resolwe☆19Aug 27, 2026Updated last week
- Nextstrain build for Zika virus☆11Aug 3, 2026Updated 3 weeks ago
- ☆20Nov 30, 2023Updated 2 years ago
- Probabilistic HLA typing☆35Aug 31, 2019Updated 7 years ago