nterhoeven / blast2bedLinks
convert a blast output to a bed file
☆12Updated 10 years ago
Alternatives and similar repositories for blast2bed
Users that are interested in blast2bed are comparing it to the libraries listed below
Sorting:
- scripts for sequence and feature conversion, annotation, analysis ...☆28Updated 5 months ago
- An R package to infer and analyze synteny networks from protein sequences☆30Updated last month
- Command line tool to plot genomic coverage from a BAM file☆14Updated 2 years ago
- Improved Phased Assembler☆28Updated 3 years ago
- PoSeiDon: positive selection detection and recombination analysis pipeline☆38Updated last month
- A tool for recovering synteny blocks from multiple alignment☆30Updated 3 years ago
- scripts to parse and analyse MCScanX collinearity output☆32Updated 5 years ago
- A high performance tool to identify orthologs and paralogs across genomes.☆26Updated 2 years ago
- Yet another Hi-C scaffolding tool☆21Updated 10 months ago
- Reduction of Althaps and Duplicate Contigs for Improved Hi-C Scaffolding☆20Updated 5 months ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆27Updated 3 weeks ago
- CNEFinder: Finding Conserved Non-coding Elements in Genomes☆24Updated 4 years ago
- Computational Analysis of Gene Expression Evolution☆43Updated last week
- a broadly applicable tool for automated gene identification and retrieval☆32Updated 8 months ago
- R package for comparison of synteny conservation at the genome-wide scale.☆14Updated last year
- DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation☆13Updated 9 years ago
- Distribution of TEs and their relationship to genes in host genome☆23Updated 2 years ago
- Methods for finding associations between phenotypic and genomic differences between species using the Forward Genomics framework☆24Updated 2 years ago
- CAAStools is a bioinformatics toolbox that allows the user to identify and validate CAAS on MSA of orthologous proteins.☆21Updated last year
- ☆26Updated 4 years ago
- A stand-alone application for constructing websites for visualizing and browsing synteny blocks☆18Updated 4 years ago
- Diamond2GO is a set of tools that can rapidly assign Gene Ontology (GO) terms and perform functional enrichment for large-scale functiona…☆21Updated 2 weeks ago
- methods for orphan gene prediction paper optimization☆25Updated 3 years ago
- ☆26Updated 6 months ago
- Hierarchical clustering of cgMLST☆11Updated last year
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆31Updated 4 years ago
- CDS prediction in transcripts☆23Updated 5 months ago
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆32Updated 3 years ago