convert a blast output to a bed file
☆12Jun 19, 2015Updated 11 years ago
Alternatives and similar repositories for blast2bed
Users that are interested in blast2bed are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Convert GFF, fastas, annotation table and species name into Genbank.☆17Jan 14, 2026Updated 8 months ago
- QTL mapping in outcrossing species using CIM☆10Feb 5, 2026Updated 8 months ago
- Accompanying repository for our publications on manual curation methods for Transposable Elements.☆24Jun 26, 2024Updated 2 years ago
- ☆27Jun 8, 2022Updated 4 years ago
- ☆12Feb 14, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Phylogenetic Analysis of Long Terminal Repeat Retrotransposons☆18Oct 4, 2022Updated 4 years ago
- ☆28Feb 19, 2025Updated last year
- GAPPadder is tool for closing gaps on draft genomes with short sequencing data☆29Jun 1, 2017Updated 9 years ago
- MYB transcription factors are one of the largest gene family in plants and control many processes. This repository provides additional ba…☆12Feb 26, 2026Updated 7 months ago
- ☆14Jan 31, 2020Updated 6 years ago
- KmerGO is a user-friendly tool to identify the group-specific sequences on two groups or trait-associated sequences of high throughput se…☆15Mar 6, 2023Updated 3 years ago
- Command line tool to plot genomic coverage from a BAM file☆14Apr 5, 2023Updated 3 years ago
- An Amazing Shiny App☆17Sep 9, 2021Updated 5 years ago
- Summary statistics for repertoires☆17Feb 1, 2023Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Alignment-Free methods Adjusted by Neural Network☆13Feb 20, 2020Updated 6 years ago
- Correlation-based approach for identification of endocrine interactions☆14Jan 18, 2022Updated 4 years ago
- SambaR: Snp datA Management and Basic Analyses in R☆33Jul 9, 2026Updated 3 months ago
- Quality control plotting for long reads☆10May 14, 2024Updated 2 years ago
- B73Ab10 genome assembly methods☆17Jan 21, 2022Updated 4 years ago
- A k-mer frequency statistics software☆15Nov 19, 2021Updated 4 years ago
- Biodiversity Genomics Academy 2023: Understanding k-mers and ploidy using Smudgeplot☆11Sep 12, 2023Updated 3 years ago
- Multisample Variant Format ToolKit☆10Oct 12, 2021Updated 5 years ago
- Mark duplicate reads from PacBio sequencing of an amplified library☆12Feb 26, 2025Updated last year
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Trend And PeAkS (TAPAS) analysis of temporal series (e.g. paleoecological records) to assess long-term trend and detect events (and event…☆15Aug 19, 2024Updated 2 years ago
- Python module for parsing, writing, aligning, and manipulating glycan structrures☆10Updated this week
- A simple-to-use tool for visualizing and comparing genome contexts for numerous genomes☆18Dec 1, 2025Updated 10 months ago
- ☆15Jul 16, 2026Updated 2 months ago
- Workflow and script for converting genomic coordinates using MUMmer output and CrossMap☆12Jun 15, 2026Updated 3 months ago
- MegaSSR is a robust online server that identifies Simple Sequence Repeats (SSR) and enables the design of SSR markers in high-throughput …☆11Nov 25, 2024Updated last year
- Homologizer: phasing gene copies into polyploid subgenomes☆13Feb 3, 2026Updated 8 months ago
- Better Alignments with Translated HMMER☆28Updated this week
- A package code for fitting power law distributions using Bayesian or Maximum Likelihood approaches.☆12Aug 1, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- An ultra-sensitive and precise tool for characterizing T cell CDR3 sequences in TCR-seq and RNA-seq data.☆21Nov 19, 2025Updated 10 months ago
- genome annotation (RNAseq and TE) pipeline (draft)☆13Sep 17, 2026Updated 3 weeks ago
- MUMmer3☆17Jan 12, 2022Updated 4 years ago
- A repo contains historical and updated MTEC libraries.☆19Aug 28, 2026Updated last month
- Fine mapping of genes associated with Parkinson's Disease using a variety of methods☆11Mar 7, 2022Updated 4 years ago
- Fast implementation of the Neighbour-Joining method for phylogenetic inference☆21Sep 10, 2024Updated 2 years ago
- Scripts for Wang et al (2020) Evidence for widespread selection in shaping the genomic landscape during speciation of Populus.☆11Feb 15, 2020Updated 6 years ago