convert a blast output to a bed file
☆12Jun 19, 2015Updated 10 years ago
Alternatives and similar repositories for blast2bed
Users that are interested in blast2bed are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Convert GFF, fastas, annotation table and species name into Genbank.☆17Jan 14, 2026Updated 2 months ago
- ☆13Feb 14, 2023Updated 3 years ago
- Phylogenetic Analysis of Long Terminal Repeat Retrotransposons☆18Oct 4, 2022Updated 3 years ago
- Accompanying repository for our publications on manual curation methods for Transposable Elements.☆21Jun 26, 2024Updated last year
- ☆27Feb 19, 2025Updated last year
- GAPPadder is tool for closing gaps on draft genomes with short sequencing data☆28Jun 1, 2017Updated 8 years ago
- ☆24Jun 8, 2022Updated 3 years ago
- ☆14Jan 31, 2020Updated 6 years ago
- KmerGO is a user-friendly tool to identify the group-specific sequences on two groups or trait-associated sequences of high throughput se…☆13Mar 6, 2023Updated 3 years ago
- An Amazing Shiny App☆16Sep 9, 2021Updated 4 years ago
- Command line tool to plot genomic coverage from a BAM file☆14Apr 5, 2023Updated 2 years ago
- QTL mapping in outcrossing species using CIM☆10Feb 5, 2026Updated last month
- Summary statistics for repertoires☆17Feb 1, 2023Updated 3 years ago
- Alignment-Free methods Adjusted by Neural Network☆13Feb 20, 2020Updated 6 years ago
- Quality control plotting for long reads☆10May 14, 2024Updated last year
- A k-mer frequency statistics software☆15Nov 19, 2021Updated 4 years ago
- B73Ab10 genome assembly methods☆16Jan 21, 2022Updated 4 years ago
- SambaR: Snp datA Management and Basic Analyses in R☆32Oct 16, 2025Updated 5 months ago
- BuscoPhylo : Easy Busco-based phylogenomic analysis tool☆11Jul 3, 2025Updated 8 months ago
- Biodiversity Genomics Academy 2023: Understanding k-mers and ploidy using Smudgeplot☆11Sep 12, 2023Updated 2 years ago
- MYB transcription factors are one of the largest gene family in plants and control many processes. This repository provides additional ba…☆12Feb 26, 2026Updated 3 weeks ago
- Multisample Variant Format ToolKit☆10Oct 12, 2021Updated 4 years ago
- Mark duplicate reads from PacBio sequencing of an amplified library☆12Feb 26, 2025Updated last year
- Python module for parsing, writing, aligning, and manipulating glycan structrures☆10Feb 27, 2026Updated 3 weeks ago
- Correlation-based approach for identification of endocrine interactions☆13Jan 18, 2022Updated 4 years ago
- Infering ancestral synteny with hierarchical orthologous groups☆38Oct 17, 2025Updated 5 months ago
- Show your Instagram profile on your website. 🌈☆27Jan 13, 2022Updated 4 years ago
- BUSCO_Phylogenomics | Pipeline to construct species phylogenies using BUSCO proteins☆95Mar 7, 2026Updated 2 weeks ago
- A simple-to-use tool for visualizing and comparing genome contexts for numerous genomes☆18Dec 1, 2025Updated 3 months ago
- Workflow and script for converting genomic coordinates using MUMmer output and CrossMap☆12Sep 1, 2018Updated 7 years ago
- Homologizer: phasing gene copies into polyploid subgenomes☆11Feb 3, 2026Updated last month
- A package code for fitting power law distributions using Bayesian or Maximum Likelihood approaches.☆12Aug 1, 2019Updated 6 years ago
- An ultra-sensitive and precise tool for characterizing T cell CDR3 sequences in TCR-seq and RNA-seq data.☆21Nov 19, 2025Updated 4 months ago
- genome annotation (RNAseq and TE) pipeline (draft)☆13Aug 26, 2025Updated 6 months ago
- MUMmer3☆17Jan 12, 2022Updated 4 years ago
- Fast implementation of the Neighbour-Joining method for phylogenetic inference☆18Sep 10, 2024Updated last year
- A repo contains historical and updated MTEC libraries.☆18Feb 6, 2020Updated 6 years ago
- Scripts for Wang et al (2020) Evidence for widespread selection in shaping the genomic landscape during speciation of Populus.☆11Feb 15, 2020Updated 6 years ago
- Fine mapping of genes associated with Parkinson's Disease using a variety of methods☆11Mar 7, 2022Updated 4 years ago