De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk
☆10Oct 13, 2026Updated this week
Alternatives and similar repositories for lncRNA
Users that are interested in lncRNA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R scripts for NGS data visualization☆13Oct 1, 2025Updated last year
- Shell wrappers for bulk and 10X single cell NGS pipelines, RNAseq, ChIPseq, ATACseq, CUT&RUN/TAG, GWAS, etc.☆17Updated this week
- ☆18Nov 26, 2023Updated 2 years ago
- Codes for Vmap1.1 and Vmap3☆11Jan 5, 2026Updated 9 months ago
- Gene Prediction using MAKER, CEGMA, SNAP, GENEMARK & AUGUSTUS☆10Jul 20, 2017Updated 9 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Perform GWAS with gemma in a simple pipeline☆28Apr 26, 2025Updated last year
- ☆12Jun 12, 2023Updated 3 years ago
- Cookiecutter for snakemake slurm profile☆17Jul 22, 2023Updated 3 years ago
- ☆11Mar 14, 2026Updated 7 months ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- Data visualization with R☆12Dec 12, 2020Updated 5 years ago
- Set of script for the paper on the cattle graph genome☆14Jan 10, 2023Updated 3 years ago
- ☆12Sep 28, 2021Updated 5 years ago
- Scripts for bioinformatics data processing and analysis☆12Nov 7, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Tao Yan's Plot Toolkit☆13Aug 20, 2019Updated 7 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago
- Phylogenetic Analysis of Long Terminal Repeat Retrotransposons☆18Oct 4, 2022Updated 4 years ago
- ☆18Apr 18, 2024Updated 2 years ago
- ☆20Oct 4, 2023Updated 3 years ago
- ☆30Apr 16, 2023Updated 3 years ago
- A graduate-level elective course: Python Programming for Life Science Students☆10Mar 26, 2026Updated 6 months ago
- A tool to visualize the haplotype pattern and various information in excel.☆25Mar 5, 2025Updated last year
- Bioinformatics scripts for genome analysis☆17Oct 26, 2022Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Main scripts and commands used to analyze goat population genetic and domestication☆19Mar 25, 2019Updated 7 years ago
- tips and tricks in genome-wide association studies - a tutorial☆14Jul 25, 2023Updated 3 years ago
- Here, we de novo assembled 110 representative Setaria accessions from a worldwide collected 1,844 variteies, and performed pan-/graph- ge…☆30Sep 13, 2023Updated 3 years ago
- QTL mapping with binmap data☆18May 18, 2019Updated 7 years ago
- Repository☆10Oct 23, 2024Updated last year
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 5 years ago
- A python package for the identification of lncRNA from the assembled novel transcripts☆17Oct 28, 2021Updated 4 years ago
- scripts and intermediate files used to annotate TEs in Jiao et al.☆34Apr 12, 2018Updated 8 years ago
- ☆38Aug 8, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Pipeline to phase a genome into two homeologous subgenomes. Parental genomes are required.☆10May 22, 2025Updated last year
- ☆25Jul 29, 2025Updated last year
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Oct 1, 2026Updated 2 weeks ago
- ☆23Oct 30, 2022Updated 3 years ago
- ☆10Apr 10, 2016Updated 10 years ago
- Small and simple scripts useful for various bioinformatics purposes e.g. extract sequences from fasta files, rename fasta files (prefix a…☆23Jul 22, 2026Updated 2 months ago
- Phylogenetic iDentification of Subgenomes☆10Jul 7, 2022Updated 4 years ago