yaowuliu / ACATLinks
☆36Updated 4 years ago
Alternatives and similar repositories for ACAT
Users that are interested in ACAT are comparing it to the libraries listed below
Sorting:
- An R package for performing STAAR procedure in whole-genome sequencing studies☆95Updated 9 months ago
- An R package for multivariate adaptive shrinkage.☆92Updated last year
- FOCUS: Fine-mapping Of CaUsal gene Sets☆47Updated 2 years ago
- LASSO for GWAS with summary statistics☆78Updated 5 years ago
- QTL Discovery using Annotations☆28Updated 2 years ago
- Genetics ToolboX R package☆32Updated 5 years ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆51Updated 8 months ago
- LDlinkR☆62Updated last year
- Software to perform multi-ancestry SNP fine-mapping on molecular data☆28Updated 3 months ago
- Generalized linear Mixed Model Association Tests☆44Updated 2 years ago
- Code for implementing Mendelian randomization investigations☆19Updated 10 years ago
- Mediated Expression Score Regression (MESC)☆26Updated 2 weeks ago
- Scripts for running a sibling GWAS☆16Updated 3 years ago
- Every Gene Ever Annotated in published GWAS☆50Updated 2 years ago
- A new model and algorithm for multivariate Bayesian variable selection regression.☆22Updated 2 weeks ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Updated 2 years ago
- Colocalization analysis of genetic association signals☆53Updated 5 months ago
- Get SNP proxies from the 1000 Genomes Project.☆30Updated 7 years ago
- DENTIST (Detecting Errors iN analyses of summary staTISTics) is a QC tool for summary-data-based analyses.☆26Updated 2 years ago
- GWAS for survival analysis in large cohorts☆22Updated last year
- Code for creating cell-type-specific regulatory element annotation files☆18Updated last year
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆14Updated 2 years ago
- Learn and validate subtypes from multiple traits☆20Updated 4 years ago
- Primo☆16Updated 4 years ago
- Implementation of LTFH++☆11Updated this week
- ☆22Updated 2 months ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆69Updated last year
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆26Updated 4 years ago
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- RSS-NET: Regression with Summary Statistics exploiting Network Topology☆19Updated 6 months ago