An R package for performing STAAR procedure in whole-genome sequencing studies
☆107Oct 2, 2026Updated 3 weeks ago
Alternatives and similar repositories for STAAR
Users that are interested in STAAR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆80Oct 2, 2026Updated 3 weeks ago
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆39Sep 17, 2026Updated last month
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆28Nov 9, 2024Updated last year
- An R package for summarizing and visualizing association analysis results of whole-genome/whole-exome sequencing (WGS/WES) studies genera…☆14Oct 16, 2024Updated 2 years ago
- Contains code to conduct analyses presented in the IGES 2025 Educational Workshop: Practical Tutorial – A Walkthrough of Cross-Biobank An…☆15Aug 29, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆27Oct 22, 2026Updated last week
- An R package for performing MultiSTAAR procedure in whole-genome sequencing studies☆13Nov 14, 2024Updated last year
- Description of VCF to aGDS conversion and annotation on the UK Biobank RAP☆14Sep 29, 2025Updated last year
- ☆24Nov 27, 2024Updated last year
- Public Available Code to Conduct Analyses in "Evaluating the Impact of Long-term Exposure to Fine Particulate Matter on Mortality Among t…☆20Nov 11, 2023Updated 2 years ago
- ☆40Jul 4, 2021Updated 5 years ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Feb 27, 2020Updated 6 years ago
- A flexible tool for meta-analysis☆12Jul 31, 2024Updated 2 years ago
- Configs and descriptions of circos plots created on FUMA web application☆15Dec 10, 2017Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Data and code for the Effector index☆14Oct 13, 2020Updated 6 years ago
- R package for RIVER (RNA-Informed Variant Effect on Regulation)☆12Mar 5, 2020Updated 6 years ago
- Multi-ancestry Conditional and Joint Analysis of GWAS summary statistics☆19Oct 20, 2026Updated last week
- Generalized linear Mixed Model Association Tests☆50Nov 21, 2025Updated 11 months ago
- Data management of large-scale whole-genome sequence variant calls using GDS files (Development version only)☆49Updated this week
- GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with popula…☆44Mar 4, 2026Updated 7 months ago
- SEEKIN: SEquence-based Estimation of KINship☆15Oct 11, 2017Updated 9 years ago
- Convergent Policy Optimization for Safe Reinforcement Learning☆11Oct 26, 2019Updated 7 years ago
- Cross-population polygenic prediction☆114Oct 9, 2026Updated 3 weeks ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Sequence kernel association test (SKAT)☆55Aug 7, 2025Updated last year
- hJAM is a hierarchical model which unifies the framework of Mendelian Randomization and Transcriptome-wide association studies.☆12Jan 19, 2024Updated 2 years ago
- Meta-analysis of genomewide association scans☆69Jul 18, 2024Updated 2 years ago
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆13Jun 11, 2019Updated 7 years ago
- Rare variant test software for next generation sequencing data☆145Jan 26, 2022Updated 4 years ago
- regenie is a C++ program for whole genome regression modelling of large genome-wide association studies.☆271Oct 2, 2026Updated 3 weeks ago
- R Interface to CoreArray Genomic Data Structure (GDS) Files (Development version only)☆20Oct 11, 2026Updated 2 weeks ago
- An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.☆41Feb 8, 2026Updated 8 months ago
- The gsmr R-package implements the GSMR (Generalised Summary-data-based Mendelian Randomisation) method that uses GWAS summary statistics …☆23Apr 26, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Send R code/R scripts/shell commands to LSF cluster without leaving R☆27Mar 14, 2025Updated last year
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆36Jun 19, 2026Updated 4 months ago
- Functional-trained variant effect predictor☆18Aug 27, 2026Updated 2 months ago
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1☆19Apr 24, 2020Updated 6 years ago
- ☆199May 2, 2022Updated 4 years ago
- ☆22Jun 12, 2023Updated 3 years ago
- R package for the analysis of massive SNP arrays.☆227Jul 10, 2026Updated 3 months ago