getian107 / SuSiExLinks
Cross-population fine-mapping
☆39Updated 11 months ago
Alternatives and similar repositories for SuSiEx
Users that are interested in SuSiEx are comparing it to the libraries listed below
Sorting:
- ☆23Updated 3 months ago
- A tool to plot significant regions of GWAS☆29Updated 2 years ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆25Updated last year
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆51Updated 8 months ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆36Updated last year
- TWAS-pipeline☆24Updated 4 years ago
- ☆63Updated 3 years ago
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆54Updated last year
- An R package for creating ggplot2 based miami plots.☆18Updated 8 months ago
- Manhattan++☆28Updated last year
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 8 years ago
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆47Updated 2 weeks ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Updated 3 years ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆35Updated 5 months ago
- Software for estimating correlation of trait effect sizes across populations☆50Updated 5 months ago
- Colocalization analysis of genetic association signals☆53Updated 5 months ago
- Quality control steps for GWAS☆25Updated 2 years ago
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆32Updated 11 months ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆34Updated 5 years ago
- ☆21Updated 2 years ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆43Updated 11 months ago
- Fine-mapping with infinitesimal effects☆20Updated 5 months ago
- GWAS genetics Fine-mapping method☆26Updated last year
- Enhanced version of the FastQTL QTL mapper☆70Updated 2 years ago
- Fast, integrative fine mapping with functional data☆61Updated 6 years ago
- Make LocusZoom-like plots with your own LD matrix.☆47Updated 3 years ago
- A Fine-Mapping pipeline☆21Updated 6 years ago
- An accurate and efficient HLA imputation method.☆26Updated 2 years ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆41Updated 2 years ago
- Create LocusZoom-style plots in R.☆22Updated 2 years ago