Alternatives and similar repositories for mrlocus

Users that are interested in mrlocus are comparing it to the libraries listed below

• jiazhao97 / BWMR
  BWMR (Bayesian Weighted Mendelian Randomization)
  ☆19Updated 2 years ago
• hailianghuang / FM-summary
  Fine-mapping method only using summary statistics
  ☆20Updated 9 years ago
• huwenboshi / s-ldxr
  Stratified squared trans-ethnic genetic correlation
  ☆14Updated 3 years ago
• FinucaneLab / gene_features
  ☆33Updated last year
• huwenboshi / hess
  Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.
  ☆41Updated 7 years ago
• thewonlab / H-MAGMA
  ☆35Updated 2 years ago
• douglasyao / mesc
  Mediated Expression Score Regression (MESC)
  ☆26Updated 3 years ago
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆54Updated 3 months ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆46Updated 2 years ago
• yanglab-emory / TIGAR
  ☆21Updated this week
• sb452 / mr-code
  Code for implementing Mendelian randomization investigations
  ☆18Updated 9 years ago
• StatFunGen / pecotmr
  Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.
  ☆29Updated 2 weeks ago
• clagiamba / moloc
  ☆36Updated 4 years ago
• MalteThodberg / awesome-multitrait-gwas
  List of software packages for multi-trait / multiple-trait / multivariate / high-dimensional GWAS
  ☆31Updated 4 months ago
• Jmtorres138 / TACTICAL
  Tissue of ACTion scores for Investigating Complex trait-Associated Loci
  ☆13Updated 4 years ago
• mancusolab / sushie
  Software to perform multi-ancestry SNP fine-mapping on molecular data
  ☆27Updated last month
• mancusolab / ma-focus
  MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets
  ☆36Updated last year
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆33Updated 5 years ago
• bogdanlab / fizi
  Leveraging functional information to improve GWAS summary statistic imputation
  ☆19Updated 4 years ago
• jrs95 / gassocplot2
  Regional association plots
  ☆25Updated last year
• jrs95 / geni.plots
  GENI plots to visualise results from genome-wide association studies
  ☆30Updated 11 months ago
• lcrawlab / i-LDSC
  Code and simulations using interaction-LD score regression
  ☆13Updated last year
• xtonyjiang / GNOVA
  A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.
  ☆30Updated last year
• MRC-Epid / pGWAS_discovery
  Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"
  ☆25Updated 4 years ago
• opain / TWAS-GSEA
  R script that performs gene-set or gene property analysis using TWAS results.
  ☆32Updated last year
• Jeremy37 / AD_finemap
  Code supporting analyses in paper on fine-mapping AD loci
  ☆16Updated 4 years ago
• opentargets / genetics-colocalisation
  Colocalisation pipeline for Open Targets Genetics
  ☆17Updated 3 years ago
• precimed / python_convert
  A collection of various utilities for GWAS summary statistics
  ☆32Updated last year
• borangao / MESuSiE
  ☆18Updated last month
• wuyangf7 / OPERA
  This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…
  ☆37Updated 11 months ago