lcrawlab / i-LDSCLinks
Code and simulations using interaction-LD score regression
☆13Updated last year
Alternatives and similar repositories for i-LDSC
Users that are interested in i-LDSC are comparing it to the libraries listed below
Sorting:
- R script that performs gene-set or gene property analysis using TWAS results.☆32Updated last year
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆31Updated last year
- Fine-mapping method only using summary statistics☆20Updated 9 years ago
- Software to perform multi-ancestry SNP fine-mapping on molecular data☆29Updated 3 weeks ago
- Scripts for running a sibling GWAS☆16Updated 3 years ago
- Mediated Expression Score Regression (MESC)☆27Updated last month
- Code for implementing Mendelian randomization investigations☆19Updated 10 years ago
- GENI plots to visualise results from genome-wide association studies☆30Updated last year
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆14Updated 3 years ago
- ☆21Updated 4 months ago
- Leveraging functional information to improve GWAS summary statistic imputation☆19Updated 4 years ago
- Estimate genetic correlation using predicted expression☆23Updated 7 years ago
- Tool for predicting TWAS features (e.g. gene expression) in a target sample☆16Updated 6 months ago
- Colocalization analysis of genetic association signals☆53Updated 6 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 7 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆48Updated 2 years ago
- Stratified squared trans-ethnic genetic correlation☆14Updated 3 years ago
- ☆22Updated 3 months ago
- Older repo for MRLocus. See new website for software usage guide:☆15Updated 2 years ago
- Regional association plots☆26Updated last year
- Regional association plots☆24Updated last year
- Heritability, genetic correlation and functional enrichment estimation for case-control studies☆19Updated 2 years ago
- ☆11Updated 3 years ago
- Tissue of ACTion scores for Investigating Complex trait-Associated Loci☆13Updated 4 years ago
- ☆19Updated 4 months ago
- Software to infer latent pleiotropic components from GWAS summary data☆15Updated 11 months ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆31Updated 3 weeks ago
- Code supporting analyses in paper on fine-mapping AD loci☆16Updated 4 years ago
- ☆35Updated 2 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆35Updated 5 years ago