R Interface to CoreArray Genomic Data Structure (GDS) Files (Development version only)
☆20Jun 15, 2026Updated this week
Alternatives and similar repositories for gdsfmt
Users that are interested in gdsfmt are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Manipulating External Pointer☆13Sep 27, 2025Updated 8 months ago
- Calculates the probability of a haplotype given a population reference panel☆12Dec 9, 2024Updated last year
- Julia module to handle PLINK BED files☆11Jul 10, 2018Updated 7 years ago
- Variant Calling for the HPRC2☆16May 26, 2026Updated 3 weeks ago
- PySeqArray: data manipulation of whole-genome sequencing variants with SeqArray files in Python (pre-release version)☆14Aug 25, 2017Updated 8 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Programs for performing various population genetic analyses☆12Apr 5, 2026Updated 2 months ago
- ☆15Mar 20, 2023Updated 3 years ago
- Analysis and figure generation code for the ABRF NGS Phase II Study on DNA-seq reproducibility☆18Aug 5, 2021Updated 4 years ago
- ☆12Sep 6, 2019Updated 6 years ago
- R package: parallel computing toolset for relatedness and principal component analysis of SNP data (Development version only)☆113Updated this week
- Haplotype phaser for next-generation sequencing data☆13Jan 13, 2022Updated 4 years ago
- Process linked-read data, from raw sequences to phased haplotypes, batteries included. Works with WGS too!☆20Jun 12, 2026Updated last week
- ☆19May 27, 2022Updated 4 years ago
- A flexible tool for meta-analysis☆11Jul 31, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆38Jul 4, 2021Updated 4 years ago
- LorMe package for R:Lightening One-code Resolving Microbial Ecology Program☆15Jan 13, 2026Updated 5 months ago
- Combine structural variation outputs from long sequencing reads into a superior call set☆18Aug 6, 2025Updated 10 months ago
- Predicts adaptive introgression using a CNN trained on genotype matrices.☆17Nov 28, 2023Updated 2 years ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆28Nov 9, 2024Updated last year
- ☆17Jan 5, 2021Updated 5 years ago
- Developing efficient Bayesian phylogenetic inference methods☆12Dec 21, 2019Updated 6 years ago
- The fastest VCF/BCF parser in R https://doi.org/10.1093/bioinformatics/btae049☆20Mar 31, 2026Updated 2 months ago
- a C++ API of htslib to be easily integrated and safely used. More importantly, it can be callled seamlessly in R/Python/Julia etc.☆25Jun 7, 2026Updated last week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Convergent Policy Optimization for Safe Reinforcement Learning☆11Oct 26, 2019Updated 6 years ago
- ☆20Oct 4, 2023Updated 2 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆33Feb 23, 2026Updated 3 months ago
- hJAM is a hierarchical model which unifies the framework of Mendelian Randomization and Transcriptome-wide association studies.☆11Jan 19, 2024Updated 2 years ago
- An R package for performing STAAR procedure in whole-genome sequencing studies☆100May 29, 2026Updated 3 weeks ago
- Efficient, parallel compression for terabyte-scale data☆63Feb 25, 2026Updated 3 months ago
- Infering ancestral synteny with hierarchical orthologous groups☆37Oct 17, 2025Updated 8 months ago
- A short tutorial for Tax4Fun2☆26Aug 24, 2024Updated last year
- BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.☆19Aug 29, 2017Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Just Annotate My Genome☆19May 21, 2026Updated 3 weeks ago
- A matrix-like wrapper around PLINK .bed files☆19Sep 6, 2024Updated last year
- Structure Harvester is a program for parsing the output of Pritchard's STRUCTURE and for performing the Evanno method.☆35Jul 9, 2022Updated 3 years ago
- Dotplot large Genomes in an Interactive, Efficient and Simple way☆115Jun 8, 2026Updated last week
- Epigenomics Program pipeline to analyze SHARE-seq data.☆23Mar 30, 2025Updated last year
- GWAS analysis process based on EMMAX software☆18Dec 12, 2023Updated 2 years ago
- Toolkit for evolutionary analyses of linkage groups☆34Jul 17, 2024Updated last year