zhengxwen / gdsfmtLinks
R Interface to CoreArray Genomic Data Structure (GDS) Files (Development version only)
☆20Updated 2 months ago
Alternatives and similar repositories for gdsfmt
Users that are interested in gdsfmt are comparing it to the libraries listed below
Sorting:
- R package to estimate kinship and FST from SNP data☆21Updated last year
- Effective Computing—Resources for Computational Biologists☆27Updated 5 years ago
- Data management of large-scale whole-genome sequence variant calls using GDS files (Development version only)☆46Updated last month
- Genomic plot in trellis layout☆42Updated last year
- R interface to 'Gos'☆39Updated 2 years ago
- TOP results by CONfident efFECT Sizes.☆15Updated last year
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated this week
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 7 years ago
- QTL analysis software for high-dimensional data and complex cross designs☆37Updated 6 months ago
- A smorgasbord of R functions for performing and teaching population genomic analyses☆19Updated 3 months ago
- ☆29Updated last year
- Example data for R/qtl2☆13Updated 4 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆32Updated 2 months ago
- Glimma R package☆50Updated last year
- Generalized linear Mixed Model Association Tests☆44Updated 3 weeks ago
- Tao Yan's Plot Toolkit☆12Updated 6 years ago
- An R package to help in plotting PCA results nicely.☆12Updated 5 years ago
- fastqcr: Quality Control of Sequencing Data☆75Updated 2 years ago
- An extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimension☆14Updated 4 months ago
- Easy to define segments in y-axis for 'ggplot2'.☆27Updated 6 years ago
- Drawing 'dendrogram' using 'ggtree'☆13Updated last month
- ☆20Updated last month
- Bayesian hierarchical model for complex trait analysis☆46Updated last year
- R package to quickly obtain count vectors from indexed bam files☆15Updated 6 months ago
- K-mer Counting for Biological Sequence Analysis☆27Updated 6 years ago
- The fastest VCF/BCF parser in R https://doi.org/10.1093/bioinformatics/btae049☆18Updated 3 weeks ago
- R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data☆21Updated 6 months ago
- R/qtl: A QTL mapping environment☆86Updated last week
- A small R package to make sequencing read coverage plots in R.☆40Updated last month
- Grid and ggplot2 based visualization for biological data☆115Updated 2 months ago