A toolkit for biomedical data integration and harmonization
☆25May 29, 2026Updated 2 weeks ago
Alternatives and similar repositories for bdi-kit
Users that are interested in bdi-kit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Alpha-AutoML is a Python library for automatically generating end-to-end machine learning pipelines.☆23Dec 17, 2024Updated last year
- Variant impact phenotyping using Perturb-seq☆10Apr 22, 2024Updated 2 years ago
- Model and datasets for schema matching☆15Jul 17, 2021Updated 4 years ago
- Master thesis - reproducing state-of-the-art schema matching algorithms☆14Jul 6, 2023Updated 2 years ago
- Perturb-seq analysis package☆16May 2, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Official implementation of Neuronal Time-Invariant Representations (NeuPRINT), NeurIPS 2023☆10Mar 10, 2026Updated 3 months ago
- Showcase notebooks for getML☆19Jan 20, 2026Updated 4 months ago
- Figure depicting the breadth of multimodal scRNA-seq technologies☆16Apr 3, 2019Updated 7 years ago
- MARVIS (Modality Adaptive Reasoning over VISualizations) is an 'everything predictor' powered by VLMs + embeddings☆18Apr 15, 2026Updated 2 months ago
- Quick script to parse out medications from discharge summaries in MIMIC format. Not that this approach uses minimal NLP, and can be vatly…☆30Nov 18, 2017Updated 8 years ago
- Proteomics Toolset for Integrative Data Analysis☆26Oct 7, 2025Updated 8 months ago
- Attribute Value Extraction using Large Language Models☆28May 24, 2024Updated 2 years ago
- The public repository for the Proteomic Data Commons UI and APIs☆17Feb 19, 2026Updated 3 months ago
- ☆11Apr 12, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A python package for removing duplicate text in clinical notes or other documents☆39Aug 6, 2020Updated 5 years ago
- Official repository for Characterization of tumor heterogeneity through segmentation-free representation learning on multiplexed imaging …☆15Sep 28, 2025Updated 8 months ago
- ArcheType uses LLMs to automatically assign custom labels to your tabular data☆19May 21, 2025Updated last year
- TuneTables is a tabular classifier that implements prompt tuning for frozen prior-fitted networks.☆24Mar 31, 2025Updated last year
- A Mermaid widget for interactively exploring Mermaid diagrams in notebooks and Panel data apps☆12Oct 25, 2024Updated last year
- Git Repo for simulating Boolean Models☆40Nov 7, 2025Updated 7 months ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 5 years ago
- Pipeline Profiler is a tool for visualizing machine learning pipelines generated by AutoML tools.☆87Sep 13, 2023Updated 2 years ago
- A curated list of awesome Machine Learning frameworks, libraries and software. With repository stars⭐ and forks🍴☆17Updated this week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Supporting material of talks given at useR!2024☆13Jul 12, 2024Updated last year
- ☆14May 30, 2023Updated 3 years ago
- ☆22Jan 3, 2023Updated 3 years ago
- Transcriptional regulatory network inference from gene expression and prior information with LASSO-StARS☆15May 3, 2022Updated 4 years ago
- SEAL GUI for DOS☆14Jun 14, 2023Updated 3 years ago
- Software for creating and comparing genome fingerprints.☆11Jun 30, 2024Updated last year
- ☆35Jul 21, 2021Updated 4 years ago
- De novo genome assembler.☆12Jul 30, 2018Updated 7 years ago
- Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens☆32Mar 21, 2019Updated 7 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Interactive visual analytic tool for exploring epigenomics data w/ associated metadata, powered by HiGlass and Gosling☆13Nov 10, 2023Updated 2 years ago
- computational training at Fred Hutch☆12Jun 11, 2021Updated 5 years ago
- Fast sequence vectorization for metagenomics analysis. Converts input sequences into oligonucleotide frequency vectors, fast!☆14May 12, 2024Updated 2 years ago
- ☆11Updated this week
- The Genomics Tertiary Analysis and Machine Learning Using Amazon SageMaker solution creates a scalable environment in AWS to develop mach…☆11Jul 7, 2023Updated 2 years ago
- a GitHub action to run `pre-commit` with `uv`☆21May 31, 2026Updated 2 weeks ago
- ☆13Nov 30, 2018Updated 7 years ago