CSB5 / CaDRReS-Sc
CaDRReS-Sc is a framework for analyzing drug response heterogeneity based on single-cell RNA-seq data
☆17Updated 2 years ago
Alternatives and similar repositories for CaDRReS-Sc:
Users that are interested in CaDRReS-Sc are comparing it to the libraries listed below
- Materials and scripts for building cell type encyclopedia table☆19Updated 3 months ago
- R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.☆45Updated 3 months ago
- ☆44Updated 2 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆41Updated last year
- ☆42Updated last year
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆34Updated 4 years ago
- analysis script for GBM single cell RNA seq data☆17Updated 3 years ago
- ACTIONet single-cell analysis framework☆38Updated 7 months ago
- ☆40Updated 4 years ago
- R-package for the analysis of single-cell TCR/BCR data in the Seurat ecosystem☆20Updated last week
- Tools for sgRNA calling in direct capture Perturb-seq data☆32Updated last year
- Constructing gene regulatory networks by integrating scRNA-seq and scATAC-seq data☆12Updated 3 years ago
- ☆16Updated last year
- cTPnet Package☆25Updated 2 years ago
- ☆19Updated 3 years ago
- Robustness and applicability of transcription factor and pathway analysis tools on single-cell RNA-seq data☆26Updated 5 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆30Updated 9 months ago
- Single cell omics biology annotations☆51Updated last month
- ☆15Updated 9 months ago
- ☆21Updated 3 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated last month
- Gene Set + S2G strategy annotations analyzed for disease architecture☆51Updated 2 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆74Updated 11 months ago
- benchmark for single-cell RNA-seq imputation methods☆25Updated last year
- ☆30Updated 2 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆28Updated 4 months ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆40Updated 3 months ago
- ☆22Updated 5 months ago
- Single-cell Case Control Analysis☆48Updated 5 months ago
- Standalone shiny server container for viewing CellChat object☆12Updated 4 years ago