Alternatives and similar repositories for libpll-2

Users that are interested in libpll-2 are comparing it to the libraries listed below

• danlwarren / RWTY
  R We There Yet?
  ☆32Updated 9 months ago
• emmanuelparadis / phylobench
  ☆11Updated 7 months ago
• ropensci / beautier
  R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2
  ☆13Updated 3 weeks ago
• ms609 / TreeDist
  Calculate distances between phylogenetic trees in R
  ☆35Updated last month
• ropensci / babette
  babette is an R package to work with BEAST2
  ☆46Updated last week
• emvolz / treedater
  Scalable relaxed clock phylogenetic dating
  ☆27Updated 3 months ago
• dib-lab / SSUsearch
  A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis
  ☆10Updated 9 years ago
• merlebehr / treeSeg
  Implementation of the treeSeg algorithm as an R package.
  ☆14Updated 3 years ago
• lukejharmon / pcm
  A textbook for phylogenetic comparative methods.
  ☆43Updated 6 years ago
• KlausVigo / ggnetworx
  phylogenetic networks using ggplot2 and ggtree
  ☆13Updated last year
• thibautjombart / treespace
  Explore spaces of phylogenetic trees
  ☆29Updated 4 months ago
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆72Updated 3 months ago
• tbradley1013 / tree-subset-shiny
  This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees
  ☆15Updated 6 years ago
• mikemc / metacal
  Metagenomics calibration R package
  ☆20Updated 3 years ago
• ropensci / beastier
  R package to run BEAST2
  ☆11Updated 3 weeks ago
• jgx65 / hierfstat
  the hierfstat package
  ☆25Updated last year
• liamrevell / learnPopGen
  initial commit
  ☆26Updated 3 years ago
• thijsjanzen / treestats
  ☆19Updated last month
• ngs-docs / 2015-nov-adv-rna
  ☆18Updated 10 years ago
• nickloman / ebov
  Ebola virus surveillance
  ☆15Updated 9 years ago
• ropensci / phylotaR
  An automated pipeline for retrieving orthologous DNA sequences from GenBank in R
  ☆25Updated 4 months ago
• lamho86 / phylolm
  ☆36Updated last year
• ropensci-archive / onekp
  ARCHIVED Access sequences from the 1000 Plant Initiative (1KP)
  ☆13Updated last month
• thomasp85 / FindMyFriends
  Fast alignment-free pangenome creation and exploration
  ☆28Updated 5 years ago
• NovembreLab / PCAviz
  An R package to help in plotting PCA results nicely.
  ☆12Updated 5 years ago
• YuLab-SMU / tidytree
  A Tidy Tool for Phylogenetic Tree Data Manipulation
  ☆57Updated last year
• cjbattey / driftR
  population genetic simulations with R and Shiny
  ☆28Updated last year
• jennahamlin / tinselR
  An Amazing Shiny App
  ☆17Updated 4 years ago
• vsbuffalo / msr
  Process MS results in R, in a tidy way
  ☆16Updated 7 years ago
• mdkarcher / phylodyn
  ☆19Updated 4 years ago