Alternatives and similar repositories for libpll-2

Users that are interested in libpll-2 are comparing it to the libraries listed below

• danlwarren / RWTY
  R We There Yet?
  ☆31Updated 3 months ago
• emvolz-phylodynamics / treestructure
  ☆17Updated 3 weeks ago
• dib-lab / SSUsearch
  A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis
  ☆10Updated 9 years ago
• vsbuffalo / msr
  Process MS results in R, in a tidy way
  ☆17Updated 7 years ago
• emvolz / treedater
  Scalable relaxed clock phylogenetic dating
  ☆25Updated last year
• weissmanlab / magic
  Minimal Assumption Genomic Inference of Coalescence
  ☆14Updated last year
• lpipes / tronko
  A rapid phylogeny-based method for accurate community profiling of large-scale metabarcoding datasets
  ☆24Updated 3 months ago
• merlebehr / treeSeg
  Implementation of the treeSeg algorithm as an R package.
  ☆14Updated 3 years ago
• emmanuelparadis / phylobench
  ☆11Updated 2 months ago
• ropensci / beautier
  R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2
  ☆13Updated 2 months ago
• j-a-thia / genomalicious
  A smorgasbord of R functions for population genomic analyses
  ☆18Updated this week
• ropensci / babette
  babette is an R package to work with BEAST2
  ☆46Updated last month
• dorolin / rearrvisr
  An R package to detect, classify, and visualize genome rearrangements
  ☆14Updated 4 years ago
• thijsjanzen / treestats
  ☆19Updated 3 weeks ago
• jgx65 / hierfstat
  the hierfstat package
  ☆25Updated 7 months ago
• mdkarcher / phylodyn
  ☆18Updated 3 years ago
• bcm-uga / pcadapt
  Performing highly efficient genome scans for local adaptation with R package pcadapt v4
  ☆41Updated 9 months ago
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆71Updated 3 weeks ago
• liamrevell / learnPopGen
  initial commit
  ☆26Updated 2 years ago
• duchene / phylomad
  ☆19Updated last year
• genomematt / xenomapper
  A utility for splitting mixed origin NGS reads
  ☆10Updated 4 years ago
• ngs-docs / 2015-nov-adv-rna
  ☆18Updated 9 years ago
• lukejharmon / pcm
  A textbook for phylogenetic comparative methods.
  ☆44Updated 5 years ago
• sa-lee / starmie
  starmie: plotting and inference for population structure models
  ☆13Updated 6 years ago
• green-striped-gecko / dartR
  Importing and Analysing DArT type snp and silicodart data
  ☆34Updated 3 months ago
• thomasp85 / FindMyFriends
  Fast alignment-free pangenome creation and exploration
  ☆27Updated 5 years ago
• lamho86 / phylolm
  ☆37Updated 8 months ago
• ropensci / chromer
  package for interacting with the chromosome counts database (CCDB) at https://taux.evolseq.net/CCDB_web/
  ☆12Updated last year
• mikemc / metacal
  Metagenomics calibration R package
  ☆20Updated 3 years ago
• nickloman / ebov
  Ebola virus surveillance
  ☆16Updated 8 years ago