nickloman / ebovLinks
Ebola virus surveillance
☆15Updated 9 years ago
Alternatives and similar repositories for ebov
Users that are interested in ebov are comparing it to the libraries listed below
Sorting:
- ☆18Updated 10 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 6 years ago
- A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis☆10Updated 9 years ago
- Minimal Assumption Genomic Inference of Coalescence☆14Updated 2 years ago
- ☆18Updated 8 years ago
- A utility for splitting mixed origin NGS reads☆10Updated 4 years ago
- R We There Yet?☆32Updated 9 months ago
- Pipelines to do MinION sequencing of Zika virus☆15Updated 6 years ago
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- Nanopore desc☆18Updated 9 years ago
- Color DNA/RNA bases in terminal output☆21Updated 8 years ago
- R Interface to the NCBI SRA metadata☆23Updated 7 years ago
- Algorithm to divide a phylogenetic tree into segments based on phenotypes at the leaves of the tree☆25Updated 7 years ago
- Snakemake skeleton - Build workflows with Snakemake☆19Updated last year
- blast, shmlast☆21Updated 5 years ago
- reference free variant assembly☆34Updated 2 years ago
- Utility program for extracting sequences from a fasta/fastq file☆35Updated last year
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- Reproducible Phylogenomics☆22Updated 9 years ago
- Fast but inaccurate adapter trimmer for Illumina reads☆16Updated 3 years ago
- De novo estimates of genetic relatedness from next-gen sequencing data☆45Updated 6 years ago
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Updated 7 years ago
- Classify sequencing reads using MinHash.☆48Updated 5 years ago
- Clustering phylogenetic trees with python☆26Updated last year
- ☆15Updated 7 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 6 years ago
- Using kallisto for metagenomic analysis☆49Updated 8 years ago
- Analysis of RNAseq data from (host-associated) microbial mixtures☆12Updated 6 years ago
- Preprocessing paired-end reads produced with experiment-specific protocols☆32Updated 7 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year