nickloman / ebov

Related projects ⓘ

Alternatives and complementary repositories for ebov

• ngs-docs / 2015-nov-adv-rna
  ☆18Updated 8 years ago
• nickloman / poredb
  ☆19Updated 7 years ago
• dib-lab / SSUsearch
  A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis
  ☆10Updated 8 years ago
• tseemann / homebrew-bioinformatics-linux
  Homebrew formulae for bioinformatics software only available for Linux
  ☆27Updated 5 years ago
• opencb / hpg-pore
  Nanopore desc
  ☆18Updated 8 years ago
• camillescott / shmlast
  blast, shmlast
  ☆21Updated 4 years ago
• DRL / blobtools-light
  Light version blobtools package - NO LONGER MAINTAINED! DO NOT USE!
  ☆8Updated 8 years ago
• ktrappe / daisy
  Horizontal Gene Transfer Detection by Mapping Sequencing Reads
  ☆20Updated 7 years ago
• COMBINE-lab / RapClust
  Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes
  ☆30Updated 4 months ago
• ryanlayer / svv
  Stupid Simple Structural Variant View
  ☆25Updated 7 years ago
• weissmanlab / magic
  Minimal Assumption Genomic Inference of Coalescence
  ☆14Updated last year
• COMBINE-lab / shoal
  Improved multi-sample transcript abundance estimates using adaptive priors
  ☆20Updated 6 years ago
• genomematt / xenomapper
  A utility for splitting mixed origin NGS reads
  ☆10Updated 3 years ago
• bede / kindel
  Indel-aware consensus from aligned BAMs
  ☆20Updated last year
• ansariazim / treeBreaker
  Algorithm to divide a phylogenetic tree into segments based on phenotypes at the leaves of the tree
  ☆25Updated 6 years ago
• seandavi / SRAdbV2
  R Interface to the NCBI SRA metadata
  ☆23Updated 5 years ago
• paudano / kestrel
  Mapping-free variant caller for short-read Illumina data
  ☆18Updated 4 years ago
• karel-brinda / samsift
  SAMsift: advanced filtering and tagging of SAM/BAM alignments using Python expressions.
  ☆23Updated 6 years ago
• scwatts / genome_painter
  Paint genomes with taxa-specific k-mer probabilities
  ☆15Updated 2 years ago
• alexiswl / poreduck
  A comprehensive toolkit for running Oxford Nanopore's MinION
  ☆12Updated 6 years ago
• vice87 / gam-ngs
  Genomic Assemblies Merger for NGS
  ☆26Updated 11 months ago
• mreppell / Karp
  Accurate and fast taxonomic classification using pseudoaligning
  ☆21Updated 7 years ago
• xa6xa6 / metaOthello
  ☆16Updated 6 years ago
• dkoslicki / MetaPalette
  Metagenomic profiling and phylogenetic distances via common kmers
  ☆42Updated 3 years ago
• BenLangmead / qtip
  Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities
  ☆25Updated 5 years ago
• edawson / rkmh
  Classify sequencing reads using MinHash.
  ☆48Updated 4 years ago
• rioualen / gene-regulation
  This project has moved and will no longer be edited here. New link ->
  ☆11Updated 7 years ago
• tanaes / snakemake_assemble
  Modular snakemake workflow for assembly-based metagenomics
  ☆10Updated 7 years ago
• jengelmann / FastqPuri
  fastq quality assessment and filtering tool
  ☆18Updated last year
• lh3 / trimadap
  Fast but inaccurate adapter trimmer for Illumina reads
  ☆14Updated 2 years ago