emmanuelparadis / phylobench
☆11Updated 2 years ago
Alternatives and similar repositories for phylobench:
Users that are interested in phylobench are comparing it to the libraries listed below
- R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2☆13Updated last week
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆23Updated 7 months ago
- initial commit☆26Updated 2 years ago
- R package to run BEAST2☆11Updated last week
- babette is an R package to work with BEAST2☆45Updated 2 weeks ago
- Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…☆17Updated 11 months ago
- syllabus and lectures for the course☆8Updated 8 years ago
- This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees☆15Updated 6 years ago
- A textbook for phylogenetic comparative methods.☆43Updated 5 years ago
- Phylogenetic ANalyses of DiversificAtion☆24Updated last month
- R We There Yet?☆30Updated 2 years ago
- Inferring spatiotemporal dynamics of H5N1 influenza from sequence data☆10Updated 11 years ago
- A book for teaching people how to do comparative methods in R☆20Updated last year
- ☆33Updated 4 months ago
- Scalable relaxed clock phylogenetic dating☆24Updated 11 months ago
- An R package that provides a base S4 class for comparative methods, incorporating one or more trees and trait data☆18Updated last year
- Exploring the Phylogenetic Signal in Continuous Traits☆16Updated last year
- Dendrograms for Evolutionary Analysis☆11Updated 5 years ago
- Access sequences from the 1000 Plant Initiative (1KP)☆13Updated last year
- An R package to help in plotting PCA results nicely.☆13Updated 5 years ago
- Compilation of tutorials for RevBayes☆22Updated 6 years ago
- population genetic simulations with R and Shiny☆27Updated 4 months ago
- A course in the theory and practice of phylogenetic inference from DNA sequence data☆28Updated 2 weeks ago
- A suite of methods and models for studying evolutionary radiations☆22Updated 2 years ago
- Process MS results in R, in a tidy way☆17Updated 6 years ago
- Phylogenetic plots for R and ggplot☆27Updated 12 years ago
- An Amazing Shiny App☆17Updated 3 years ago
- phylogenetic networks using ggplot2 and ggtree☆13Updated 2 months ago
- R package: Evolutionary biology in R☆15Updated 9 months ago
- ☆19Updated 8 months ago