wushyer / RGAAT_v2Links
Add multiple thread function for genome comparison
☆16Updated 4 years ago
Alternatives and similar repositories for RGAAT_v2
Users that are interested in RGAAT_v2 are comparing it to the libraries listed below
Sorting:
- Domain based annotation of transposable elements☆20Updated last month
- Genome alignment and synteny plots☆33Updated 2 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆30Updated 3 years ago
- ☆16Updated 3 years ago
- ☆29Updated 7 months ago
- ☆28Updated 3 years ago
- Create a pseudohaploid assembly from a partially resolved diploid assembly☆32Updated 5 years ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆28Updated 2 months ago
- Convert Tandem Repeat Finder dat file output into gff3 format☆28Updated last week
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆38Updated 2 years ago
- A genome assembly assessment pipeline.☆37Updated last year
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆47Updated 4 years ago
- Yet another Hi-C scaffolding tool☆22Updated last year
- Genome Annotation Pipeline☆39Updated last year
- plot genome alignment synteny☆21Updated 5 years ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆18Updated 2 years ago
- A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline☆27Updated 4 years ago
- A Hi-C scaffolding method☆22Updated 3 years ago
- ☆31Updated 10 months ago
- ☆31Updated 5 years ago
- ☆28Updated last year
- ☆32Updated 8 months ago
- Toolkit for evolutionary analyses of linkage groups☆32Updated last year
- Automatic evaluation of HGTs☆30Updated 9 months ago
- ☆41Updated 6 months ago
- Reduction of Althaps and Duplicate Contigs for Improved Hi-C Scaffolding☆20Updated 8 months ago
- ☆21Updated last year
- Dinoflagellate Annotation Workflow☆15Updated 3 years ago
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆26Updated 2 months ago