adigenova / wenganLinks
An accurate and ultra-fast hybrid genome assembler
☆86Updated last year
Alternatives and similar repositories for wengan
Users that are interested in wengan are comparing it to the libraries listed below
Sorting:
- Hybrid error correction of long reads using colored de Bruijn graphs☆106Updated last week
- A Circos-based tool to visualize genome assembly consistency or synteny between assemblies.☆90Updated last year
- A tool for Racon polishing of miniasm assemblies☆78Updated 4 months ago
- Structural Variant Identification Method using Genome Assemblies☆132Updated 3 years ago
- Mapping pipeline for data generated using Arima-HiC☆81Updated last year
- Evaluate variant calls and its combination with k-mer multiplicity☆67Updated 3 years ago
- FALCON-Phase integrates PacBio long-read assemblies with Phase Genomics Hi-C data to create phased, diploid, chromosome-scale scaffolds☆74Updated 5 years ago
- 🔗Genome assembly scaffolder using minimizer graphs☆85Updated last year
- Analysis components from Oxford Nanopore Research☆96Updated last year
- Plotting tools for nanopore methylation data☆95Updated 5 months ago
- Chromosome-level scaffolding using multiple references☆164Updated last year
- ☆119Updated 3 months ago
- RaGOO is no longer supported. Please use RagTag instead: https://github.com/malonge/RagTag☆174Updated 4 years ago
- Research release basecalling models and configurations☆117Updated 8 months ago
- A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulatio…☆121Updated 7 months ago
- Long read aligner☆115Updated 2 years ago
- Pipeline to convert a haploid assembly into diploid☆110Updated last year
- Identify and find telomeres, or telomeric repeats in a genome.☆155Updated 2 months ago
- ⛓ Long Interval Nucleotide K-mer Scaffolder☆74Updated 9 months ago
- A EXPERIMENTAL fork of minimap2 optimized for assembly-to-reference alignment☆87Updated 4 years ago
- Assemblytics is a bioinformatics tool to detect and analyze structural variants from a genome assembly by comparing it to a reference gen…☆146Updated 6 months ago
- Panacus is a tool for computing statistics for GFA-formatted pangenome graphs☆118Updated 2 weeks ago
- ✏️ Genome assembly polishing & SNV detection☆71Updated 3 months ago
- Remove CCS reads with remnant PacBio adapter sequences and convert outputs to a compressed .fastq (.fastq.gz).☆102Updated last year
- A scalable bacterial genome assembly, annotation and analysis pipeline☆74Updated 2 years ago
- Pairwise SNP distance matrix from a FASTA sequence alignment☆151Updated 3 weeks ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆59Updated 2 years ago
- Splitting of sequence reads by internal adapter sequence search☆51Updated 2 years ago
- Yet another k-mer analyzer☆157Updated 3 weeks ago
- qcat is a Python command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files.☆80Updated 5 years ago