gigascience / paper-zhang2014Links
Source code from Zhang et al., (2014) Genomic data of avian phylogenomics project. GigaScience 3:26
☆35Updated last year
Alternatives and similar repositories for paper-zhang2014
Users that are interested in paper-zhang2014 are comparing it to the libraries listed below
Sorting:
- A shiny application to visualize MCscan result☆37Updated 2 years ago
- Genome Annotation Pipeline☆36Updated 11 months ago
- Scripts and procedures for detecting positively selected genes and codons in primates☆21Updated 4 years ago
- Likelihood-based Selective Sweep Detection☆40Updated last year
- ☆32Updated 4 years ago
- scripts for the project of seven thaliana genomes assembly☆40Updated 4 years ago
- findGSE is a tool for estimating size of (heterozygous diploid or homozygous) genomes by fitting k-mer frequencies iteratively with a ske…☆38Updated last year
- read and analyse RepeatMasker output☆24Updated 2 years ago
- Plant genome assembly and annotation pipeline using snakemake☆44Updated 2 months ago
- ☆24Updated 2 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆58Updated 2 years ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆42Updated 10 months ago
- ☆42Updated last year
- Codes for the lettuce resequencing project in 2020☆31Updated 4 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆55Updated last month
- Tutorial on using popular tools for learning about population history☆51Updated 7 years ago
- HyPhy standalone analyses☆46Updated 4 months ago
- Easily construct the ML species tree with single-copy gene shared by different species.☆27Updated 6 years ago
- R package to draw syntenic plots in 3 different styles☆41Updated last year
- ☆26Updated 5 months ago
- PhyloAcc a software to detect the changes of conservation of a genomic region☆32Updated 3 months ago
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆41Updated 6 months ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- Automated de novo assembly of whole chloroplast genomes.☆46Updated 10 months ago
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆31Updated 4 years ago
- scripts for sequence and feature conversion, annotation, analysis ...☆28Updated 4 months ago
- ☆40Updated 2 years ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 2 years ago
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆33Updated 2 years ago