Source code from Zhang et al., (2014) Genomic data of avian phylogenomics project. GigaScience 3:26
☆37Dec 21, 2023Updated 2 years ago
Alternatives and similar repositories for paper-zhang2014
Users that are interested in paper-zhang2014 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- issues for semina "Data Visulization"☆13Dec 23, 2025Updated 5 months ago
- Scripts and other material for the assembly and analysis of ratite genomes.☆27Jan 18, 2023Updated 3 years ago
- Custom scripts for monotreme genome project☆19Jan 12, 2021Updated 5 years ago
- Assemble and following pipeline used in wisent genome paper.☆17Dec 23, 2016Updated 9 years ago
- Analyses of sex chromosome evolution in songbirds☆17Jun 15, 2019Updated 6 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Scripts used in the annotation of B10K genomes☆16Jun 1, 2020Updated 5 years ago
- ☆12Feb 16, 2026Updated 3 months ago
- Main scripts and commands used to analyze goat population genetic and domestication☆19Mar 25, 2019Updated 7 years ago
- Useful bioinformatic scripts☆60Feb 23, 2026Updated 3 months ago
- ☆13Apr 30, 2019Updated 7 years ago
- Killifish genomics scripts☆12Feb 19, 2021Updated 5 years ago
- BITACORA: A Bioinformatics tool for gene family annotation☆54Dec 10, 2025Updated 5 months ago
- ☆11Mar 14, 2026Updated 2 months ago
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆19Mar 26, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Long Read Based SV Calling Tools Analysis☆14Mar 22, 2024Updated 2 years ago
- ☆12Sep 6, 2019Updated 6 years ago
- scripts for the project of seven thaliana genomes assembly☆42May 22, 2021Updated 5 years ago
- scripts for sequence and feature conversion, annotation, analysis ...☆28Mar 17, 2025Updated last year
- ☆21Nov 21, 2024Updated last year
- scripts used for processing and analyzing data in the article.☆13Oct 31, 2019Updated 6 years ago
- Scripts that used in our chicken T2T manuscript.☆22Jan 14, 2026Updated 4 months ago
- Phylogenetic Analysis of Long Terminal Repeat Retrotransposons☆18Oct 4, 2022Updated 3 years ago
- ☆26Jun 8, 2022Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Plant genome assembly and annotation pipeline using snakemake☆53May 14, 2025Updated last year
- Scripts of population genomics analysis☆36May 8, 2018Updated 8 years ago
- Convergent substitution detection tool based on the PCOC model☆31Dec 2, 2021Updated 4 years ago
- A Snakemake pipeline for Quality Control of Whole Genome Sequencing data☆14Jan 18, 2022Updated 4 years ago
- Scripts and procedures for detecting positively selected genes and codons in primates☆22Nov 14, 2020Updated 5 years ago
- A python package for the identification of lncRNA from the assembled novel transcripts☆17Oct 28, 2021Updated 4 years ago
- FastRemap, a C++ tool for quickly remapping reads between genome assemblies based on the commonly used CrossMap tool. Link to paper: http…☆26Aug 24, 2022Updated 3 years ago
- ☆12Jun 12, 2023Updated 2 years ago
- Code for assembly approach presented in "Haplotype-resolved assembly of a tetraploid potato genome using long reads and low-depth offspri…☆14Nov 20, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Easily construct the ML species tree with single-copy gene shared by different species.☆27Oct 26, 2018Updated 7 years ago
- add true-negative SVs from a population callset to a truth-set.☆14Jun 17, 2022Updated 3 years ago
- Methods for finding associations between phenotypic and genomic differences between species using the Forward Genomics framework☆24Mar 26, 2026Updated 2 months ago
- Pipeline for eukaryotic genome annotation based on external evidences☆14Feb 23, 2023Updated 3 years ago
- Tools for improving the sensitivity and specificity of genome alignments☆58Mar 12, 2026Updated 2 months ago
- Codes for Vmap1.1 and Vmap3☆11Jan 5, 2026Updated 4 months ago
- A program for multimodel inference on speciation and trait evolution☆35Sep 4, 2017Updated 8 years ago