Alternatives and similar repositories for tn_test

Users that are interested in tn_test are comparing it to the libraries listed below

• MSingerLab / COMETSC
  COMET Single-Cell Marker Detection tool
  ☆31Updated 3 years ago
• shenorrLabTRDF / cellAlign
  ☆43Updated 4 years ago
• mojaveazure / loomR
  An R-based interface for loom files
  ☆67Updated 5 years ago
• randel / MIND
  Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution
  ☆47Updated 2 years ago
• skinnider / dismay
  Calculation of distance metrics for matrices
  ☆26Updated 6 years ago
• willtownes / scrna2019
  supporting code for the multinomial single cell RNA-Seq paper
  ☆52Updated 4 years ago
• bioturing / signac
  An analytics package for single cell data
  ☆22Updated 3 years ago
• anna-neufeld / countsplit
  ☆21Updated last year
• ctlab / LinSeed
  Linseed: LINear Subspace identification for gene Expresion Deconvolution
  ☆31Updated last month
• klarman-cell-observatory / scSVA
  Single-cell Scalable Visualization and Analytics
  ☆26Updated 6 years ago
• LTLA / SingleCellThoughts
  Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.
  ☆47Updated 2 weeks ago
• oganm / homologene
  An r package that works as a wrapper to homologene
  ☆46Updated last year
• kdkorthauer / scDD
  R package to identify genes with differential distributions in single-cell RNA-seq
  ☆33Updated 3 years ago
• markrobinsonuzh / conquer
  consistent quantification of external RNA-seq data sets
  ☆58Updated last year
• pachterlab / NYMP_2018
  ☆28Updated 6 years ago
• single-cell-genetics / cardelino
  Clone identification from single-cell data
  ☆61Updated 2 years ago
• theislab / pseudodynamics
  Dynamic models for single-cell RNA-seq time series.
  ☆40Updated 7 years ago
• kieranrcampbell / switchde
  Inference of switch-like differential expression along single-cell trajectories
  ☆21Updated 7 years ago
• vanheeringen-lab / scepia
  Single Cell Epigenome-based Inference of Activity
  ☆19Updated 2 years ago
• HelenaLC / muscat-comparison
  ☆12Updated last year
• genesofeve / projectR
  ☆62Updated 6 months ago
• fmicompbio / eisaR
  Exon-Intron Split Analysis (EISA) in R
  ☆16Updated 3 weeks ago
• ChristophH / in-lineage
  Data and code for the paper "Developmental diversification of cortical inhibitory interneurons"
  ☆24Updated 6 years ago
• JEFworks / MUDAN
  Multi-sample Unified Discriminant ANalysis
  ☆74Updated 2 years ago
• csoneson / rna_velocity_quant
  Evaluation of the effect of quantification choices on RNA velocity estimates
  ☆27Updated 3 years ago
• maggiecrow / DEprior
  ☆15Updated 4 years ago
• Oshlack / speckle
  R package for specialised analysis of single cell data
  ☆39Updated 2 years ago
• dgrun / RaceID
  Algorithm for the inference of cell types from single-cell RNA-seq data.
  ☆45Updated 9 years ago
• ambrosejcarr / seqc
  Single-Cell Sequencing Quality Control and Processing Software
  ☆30Updated 6 years ago
• lcmmichielsen / scHPL
  ☆37Updated 7 months ago