tommyhuangthu / EvoEF2Links
Physical energy function for protein sequence design
☆31Updated 2 years ago
Alternatives and similar repositories for EvoEF2
Users that are interested in EvoEF2 are comparing it to the libraries listed below
Sorting:
- ☆26Updated last week
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆35Updated 2 years ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆63Updated 3 weeks ago
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆26Updated last year
- ☆19Updated 2 years ago
- code for IDR binding paper 2025☆39Updated 5 months ago
- Making Protein folding accessible to all!☆22Updated last year
- An accurate and efficient protein sequence design approach☆24Updated 4 months ago
- Universal framework for physically based computational protein design☆35Updated last year
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆48Updated last year
- Fast and accurate protein domain segmentation using Invariant Point Attention☆40Updated 2 months ago
- Python package to atom map, correct and suggest enzymatic reactions☆40Updated last year
- The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability☆10Updated last year
- ☆20Updated last year
- ☆70Updated 4 months ago
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 3 years ago
- Extension of ThermoMPNN for double mutant predictions☆41Updated last week
- ☆19Updated 9 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆51Updated 2 months ago
- Some scripts that I keep using over and over.☆19Updated last month
- Modelling protein conformational landscape with Alphafold☆51Updated 2 weeks ago
- Efficient manipulation of protein structures in Python☆55Updated 9 months ago
- Some Rosetta Scripts that allow for various simple tasks☆14Updated 5 years ago
- ☆28Updated 6 months ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 3 years ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆32Updated last year
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆21Updated 6 years ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆43Updated last month
- Scores for Hydrophobicity and Charges based on SASAs☆34Updated last month
- PyDock Tutorial☆32Updated 7 years ago