tommyhuangthu / EvoEF2Links
Physical energy function for protein sequence design
☆33Updated 2 years ago
Alternatives and similar repositories for EvoEF2
Users that are interested in EvoEF2 are comparing it to the libraries listed below
Sorting:
- ☆27Updated last month
- Extension of ThermoMPNN for double mutant predictions☆46Updated last month
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆28Updated last year
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆36Updated 3 years ago
- Some scripts that I keep using over and over.☆20Updated 4 months ago
- ☆20Updated 3 years ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆49Updated last year
- Efficient manipulation of protein structures in Python☆60Updated last month
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆32Updated 2 years ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆57Updated 5 months ago
- ☆36Updated 2 years ago
- ☆29Updated 9 months ago
- ☆44Updated last year
- ☆71Updated 7 months ago
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆40Updated 4 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 4 months ago
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 3 years ago
- ☆21Updated last year
- ☆39Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆77Updated 4 months ago
- Modelling protein conformational landscape with Alphafold☆54Updated 2 months ago
- An accurate and efficient protein sequence design approach☆25Updated 8 months ago
- Making Protein folding accessible to all!☆24Updated last year
- ML-optimized library design with improved fitness and diversity for protein engineering☆36Updated last week
- code for SeqDance/ESMDance, biophysics-informed protein language models☆41Updated 7 months ago
- The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability☆14Updated 2 years ago
- ☆21Updated 2 years ago
- Python package to atom map, correct and suggest enzymatic reactions☆39Updated last year
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆47Updated last week
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆70Updated last year