☆25May 26, 2025Updated last year
Alternatives and similar repositories for DDAffinity
Users that are interested in DDAffinity are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13May 24, 2026Updated 4 months ago
- software used in paper "Antibody interface prediction with 3D Zernike descriptors and SVM"☆13Mar 28, 2021Updated 5 years ago
- Mirror of https://codeberg.org/rvhonorato/gdock >> development happens on Codeberg☆20Jul 7, 2026Updated 3 months ago
- Code for ICML 2024 paper "Learning to Predict Mutational Effects of Protein-Protein Interactions by Microenvironment-aware Hierarchical P…☆43Oct 8, 2024Updated 2 years ago
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆37Dec 11, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Scoring methods for predicting the DDG upon protein mutation☆18Feb 20, 2023Updated 3 years ago
- A protein language model for intrinsically disordered regions☆24Oct 2, 2026Updated last week
- ☆61Sep 12, 2025Updated last year
- ☆98Nov 25, 2025Updated 10 months ago
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆18Sep 10, 2024Updated 2 years ago
- Pretrained METL models with minimal dependencies☆16Sep 16, 2026Updated 3 weeks ago
- A comprehensive resource of binding sites on human surface proteins with binder seeds☆16Feb 26, 2025Updated last year
- ☆103Jul 24, 2026Updated 2 months ago
- Inpainting protein sequence and structure☆13Nov 10, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆72Aug 13, 2025Updated last year
- ESMDynamic repo☆37Jun 26, 2026Updated 3 months ago
- Retrieved Sequence Augmentation for Protein Representation Learning☆51Nov 1, 2023Updated 2 years ago
- ☆12Nov 16, 2023Updated 2 years ago
- Graph Learning of INTER-protein contacts☆11Feb 20, 2022Updated 4 years ago
- ☆21Oct 31, 2024Updated last year
- ☆12Jun 16, 2023Updated 3 years ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆73Apr 13, 2026Updated 5 months ago
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆125Aug 14, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Repository of all EJP lab computational projects☆15Feb 13, 2026Updated 7 months ago
- Python package to manage protein structures and their annotations☆46Mar 18, 2026Updated 6 months ago
- Metrics for our protein design competitions.☆36Nov 1, 2024Updated last year
- Pipeline for Nanopore sequencing: demultiplexing, variant calling, and quality visualization with error handling.☆13May 10, 2026Updated 4 months ago
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆39Apr 2, 2025Updated last year
- Binding pocket optimization based on force fields and docking scoring functions☆40Mar 19, 2025Updated last year
- Deep learning prediction of protein residue-residue distances☆23Jun 28, 2022Updated 4 years ago
- FTDMP is a software system for running docking experiments and scoring/ranking multimeric models.☆14Aug 3, 2026Updated 2 months ago
- Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models☆52Dec 16, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Python rich client for visual protein Sequence to Structure Analysis☆22Mar 31, 2026Updated 6 months ago
- ☆15Mar 28, 2025Updated last year
- mirror of https://zhanglab.ccmb.med.umich.edu/EDTSurf/☆10Jun 20, 2023Updated 3 years ago
- DeepG4: A deep learning approach to predict active G-quadruplexes☆14May 31, 2022Updated 4 years ago
- Guided Conditional Wasserstein GAN for De Novo Protein Design☆35Feb 23, 2021Updated 5 years ago
- LIVIA (Local Interaction VIsualization and Analysis) — Analyze and visualize protein interaction interfaces from structure predictions. B…☆27Updated this week
- ☆10Nov 10, 2023Updated 2 years ago