Alternatives and similar repositories for CataPro

Users that are interested in CataPro are comparing it to the libraries listed below

• wenjiegroup / ProMEP
  Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning
  ☆67Updated 4 months ago
• ScorpioLea / AiCE
  Predicting high-fitness mutations based on protein inverse folding models
  ☆70Updated 2 months ago
• Luo-SynBioLab / UniKP
  ☆87Updated last year
• AlexanderKroll / ESP
  ☆74Updated last year
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆84Updated this week
• maranasgroup / CatPred
  Machine Learning models for in vitro enzyme kinetic parameter prediction
  ☆64Updated 8 months ago
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆66Updated last year
• DunbrackLab / IPSAE
  Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3
  ☆164Updated 8 months ago
• zhanghaicang / carbonmatrix_public
  ☆118Updated 6 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆74Updated last month
• Kortemme-Lab / flex_ddG_tutorial
  ☆135Updated 3 years ago
• ai4protein / VenusFSFP
  VenusFSFP: Few-Shot Protein Fitness Prediction
  ☆102Updated 3 weeks ago
• biomed-AI / GraphEC
  ☆45Updated 4 months ago
• SLx64 / af3cli
  A command-line interface and Python library for generating AlphaFold3 input files.
  ☆38Updated 6 months ago
• JinyuanSun / PymolFold
  Protein folding in Pymol
  ☆127Updated 3 weeks ago
• Jfeldman34 / AF3Complex
  ☆51Updated 5 months ago
• LBM-EPFL / PeSTo
  Geometric deep learning method to predict protein binding interfaces from a protein structure.
  ☆150Updated 2 years ago
• AlexanderKroll / ESP_prediction_function
  ☆15Updated last year
• varun-shanker / structural-evolution
  ☆116Updated last year
• Kuhlman-Lab / evopro
  ☆92Updated 2 months ago
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆149Updated 7 months ago
• drhicks / Kejia_peptide_binders
  code for IDR binding paper 2025
  ☆61Updated 10 months ago
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆73Updated 4 years ago
• hlasimpk / af3_mmseqs_scripts
  Scripts to add mmseqs MSA/templates to alphafold3 input json and also custom template files
  ☆16Updated last year
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆68Updated 5 months ago
• ikalvet / heme_binder_diffusion
  ☆142Updated 4 months ago
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆70Updated last year
• VarunUllanat / mint
  Learning the language of protein-protein interactions
  ☆104Updated 2 months ago
• Kuhlman-Lab / ThermoMPNN
  GNN trained to predict changes in thermodynamic stability for protein point mutants
  ☆213Updated 4 months ago
• ai4protein / Pro-Prime
  ☆75Updated 3 months ago