PDV: an integrative proteomics data viewer
☆68Sep 22, 2026Updated last month
Alternatives and similar repositories for PDV
Users that are interested in PDV are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics☆136Updated this week
- A cross-platform proteomics data analysis suite☆329Oct 24, 2026Updated last week
- A label free quantification tool.☆20Jan 13, 2026Updated 9 months ago
- ☆29Updated this week
- Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments☆14Aug 20, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆17Oct 22, 2026Updated last week
- Proteomics search & quantification so fast that it feels like magic☆317Oct 22, 2026Updated last week
- Modular and user-friendly platform for AI-assisted rescoring of peptide identifications☆67Oct 9, 2026Updated 3 weeks ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆84Mar 26, 2026Updated 7 months ago
- A diaPASEF spectrum-centric analysis tool☆14Mar 23, 2026Updated 7 months ago
- ☆14Jun 26, 2026Updated 4 months ago
- An easy-to-use and interactive web application for FragPipe☆15Mar 8, 2026Updated 7 months ago
- A tool for summarizing open search results☆17Updated this week
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆32Jul 16, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆133Oct 22, 2026Updated last week
- Estimation of false discovery proportion for mass spectrometry proteomics data using entrapment☆37Aug 22, 2026Updated 2 months ago
- Democratizing ML in proteomics☆58Updated this week
- A simple tool to help you manually discover the depths of your (complex) spectra, one spectrum at a time.☆43Oct 26, 2026Updated last week
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆51Jul 13, 2026Updated 3 months ago
- High quality in silico spectral library generation for data-independent acquisition proteomics☆26Oct 24, 2026Updated last week
- De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model☆205Oct 24, 2026Updated last week
- A library for QC report based on MultiQC framework☆35Updated this week
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆60Updated this week
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆56Updated this week
- Lorikeet is a JQuery plugin to view MS/MS spectra annotated with fragment ions.☆19Sep 7, 2023Updated 3 years ago
- AutoRT: Peptide retention time prediction using deep learning☆32Jul 31, 2024Updated 2 years ago
- MSBooster allows users to add deep learning-based features to .pin files before Percolator PSM rescoring☆24Updated this week
- Deep learning framework for proteomics☆161Aug 31, 2026Updated 2 months ago
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆110Updated this week
- A list of tools on proteomics using deep learning☆111May 14, 2026Updated 5 months ago
- Semi-supervised learning for peptide identification from shotgun proteomics datasets☆144May 21, 2026Updated 5 months ago
- The ProteoWizard Library is a set of software libraries and tools for rapid development of mass spectrometry and proteomic data analysis …☆324Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆15Oct 16, 2023Updated 3 years ago
- Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling☆32Oct 15, 2024Updated 2 years ago
- A Rust library for peptide centric mass spec calculations centered around PSI standards and handling complex cases robustly☆53Updated this week
- DIA-NN - a universal automated software suite for DIA proteomics data analysis.☆493Sep 16, 2026Updated last month
- Mistle is a fast spectral search engine. It uses a fragment-indexing technique and SIMD intrinsics to match experimental MS2 spectra to l…☆15Oct 6, 2023Updated 3 years ago
- ☆39Oct 23, 2026Updated last week
- ☆37Updated this week