PDV: an integrative proteomics data viewer
☆67Sep 22, 2026Updated this week
Alternatives and similar repositories for PDV
Users that are interested in PDV are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics☆131Mar 23, 2026Updated 6 months ago
- A label free quantification tool.☆20Jan 13, 2026Updated 8 months ago
- A cross-platform proteomics data analysis suite☆320Aug 7, 2026Updated last month
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆84Mar 26, 2026Updated 5 months ago
- An easy-to-use and interactive web application for FragPipe☆15Mar 8, 2026Updated 6 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A diaPASEF spectrum-centric analysis tool☆14Mar 23, 2026Updated 6 months ago
- Lorikeet is a JQuery plugin to view MS/MS spectra annotated with fragment ions.☆19Sep 7, 2023Updated 3 years ago
- A tool integrates channel abundances from multiple TMT samples and exports a general report for downstream analysis.☆15Jun 25, 2026Updated 2 months ago
- A tool for summarizing open search results☆17May 5, 2026Updated 4 months ago
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆130Sep 14, 2026Updated last week
- AutoRT: Peptide retention time prediction using deep learning☆31Jul 31, 2024Updated 2 years ago
- ☆28Updated this week
- Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments☆14Aug 20, 2026Updated last month
- Proteomics search & quantification so fast that it feels like magic☆309Updated this week
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆50Jul 13, 2026Updated 2 months ago
- Computational analysis for mass spectrometry-based proteomics data☆22Feb 22, 2026Updated 7 months ago
- AlphaViz is a cutting-edge browser-based interactive visualization tool allowing to visualize the processed mass spectrometry data acquir…☆40Jun 3, 2026Updated 3 months ago
- DIA-NN - a universal automated software suite for DIA proteomics data analysis.☆480Sep 16, 2026Updated last week
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆109Updated this week
- A modest Feature Finder (moFF) to extract MS1 intensities from Thermo raw file☆33Apr 19, 2021Updated 5 years ago
- Graphical user interface for the ThermoRawFileParser☆25Jul 5, 2024Updated 2 years ago
- Peptide Correlation analysis☆13Oct 3, 2024Updated last year
- ☆37Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Convert ThermoFinningan RAW mass spectrometry files to the mzXML format☆17Nov 8, 2023Updated 2 years ago
- Semi-supervised learning for peptide identification from shotgun proteomics datasets☆143May 21, 2026Updated 4 months ago
- ☆15Jan 27, 2022Updated 4 years ago
- Mistle is a fast spectral search engine. It uses a fragment-indexing technique and SIMD intrinsics to match experimental MS2 spectra to l…☆15Oct 6, 2023Updated 2 years ago
- Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics☆11Jun 3, 2025Updated last year
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆94Nov 17, 2025Updated 10 months ago
- modular & open DIA search☆115Updated this week
- MSConnect is a Web-based integrated plateform to combine data storage/backup, process and visualization of MS-based Proteomics data.☆20Aug 19, 2025Updated last year
- ☆15Oct 16, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- MaxQuant and Perseus Bug Reporting☆10Mar 19, 2025Updated last year
- Fast and flexible semi-supervised learning for peptide detection in Python☆52Sep 1, 2026Updated 3 weeks ago
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆56Updated this week
- Thermo RAW file parser that runs on Linux/Mac and all other platforms that support Mono☆249Jul 8, 2026Updated 2 months ago
- Estimation of false discovery proportion for mass spectrometry proteomics data using entrapment☆37Aug 22, 2026Updated last month
- ☆17Jul 2, 2026Updated 2 months ago
- ☆17Apr 27, 2022Updated 4 years ago