The ProteoWizard Library is a set of software libraries and tools for rapid development of mass spectrometry and proteomic data analysis software.
☆312Jul 25, 2026Updated this week
Alternatives and similar repositories for pwiz
Users that are interested in pwiz are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python package for efficient mass spectrometry data processing and visualization☆169Mar 5, 2026Updated 4 months ago
- pymzML - an interface between Python and mzML Mass spectrometry Files☆192Updated this week
- The codebase of the OpenMS project☆610Updated this week
- Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provi…☆161Updated this week
- Thermo RAW file parser that runs on Linux/Mac and all other platforms that support Mono☆249Jul 8, 2026Updated 2 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Semi-supervised learning for peptide identification from shotgun proteomics datasets☆142May 21, 2026Updated 2 months ago
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆110Updated this week
- mzmine source code repository☆291Jul 13, 2026Updated last week
- Open-source C++ and Python module for opening binary timsTOF data files.☆50Apr 22, 2026Updated 3 months ago
- MZmine 2 source code repository☆140May 5, 2024Updated 2 years ago
- Libraries for fine isotopic structure calculator.☆43Updated this week
- ☆41Mar 16, 2026Updated 4 months ago
- Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics☆132Mar 23, 2026Updated 4 months ago
- Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful fo…☆93Aug 17, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆83Mar 26, 2026Updated 4 months ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆49Jul 13, 2026Updated last week
- Core Utils for Mass Spectrometry Data☆17May 11, 2026Updated 2 months ago
- A cross-platform proteomics data analysis suite☆312Updated this week
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆36Jun 13, 2026Updated last month
- DIA-NN - a universal automated software suite for DIA proteomics data analysis.☆462Jun 30, 2026Updated 3 weeks ago
- .NET DLL wrapper for reading Thermo .Raw files. Uses ThermoFisher.CommonCore NuGet packages provided by Thermo Fisher Scientific☆42Jul 10, 2025Updated last year
- Proteomics search & quantification so fast that it feels like magic☆301Jun 5, 2026Updated last month
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆128Jul 18, 2026Updated last week
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆57Apr 23, 2026Updated 3 months ago
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆99Jun 3, 2026Updated last month
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆54Updated this week
- Tools for analysis of Mass Spectrometry data using the Wasserstein metric☆19Jul 14, 2026Updated last week
- GlyCombo, a combinatorial glycan composition assignment tool☆13May 4, 2026Updated 2 months ago
- SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository…☆159Updated this week
- HUPO-PSI mass spectrometry CV☆42Jul 13, 2026Updated last week
- Python library for processing (tandem) mass spectrometry data and for computing spectral similarities.☆263Updated this week
- Democratizing ML in proteomics☆57Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Fast and flexible semi-supervised learning for peptide detection in Python☆52Updated this week
- This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis☆230Updated this week
- Automatically exported from code.google.com/p/mstoolkit☆30Dec 1, 2025Updated 7 months ago
- C# Mass Spectrometry Library☆41Jun 14, 2022Updated 4 years ago
- ☆47Mar 14, 2025Updated last year
- DeepLC: Retention time prediction for peptides carrying any modification.☆80Updated this week
- A python interface to the SAGE search engine for mass spectrometry proteomics☆15Jul 7, 2026Updated 2 weeks ago