ajmazurie / kegg-animate-pathway
Command-line utility to color objects of a KEGG pathway with arbitrary colors
☆33Updated 9 years ago
Alternatives and similar repositories for kegg-animate-pathway:
Users that are interested in kegg-animate-pathway are comparing it to the libraries listed below
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 5 years ago
- documentation for trackViewer☆29Updated 5 years ago
- tools to find circRNAs in RNA-seq data☆40Updated 7 years ago
- ☆30Updated 4 years ago
- QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.☆31Updated 8 years ago
- High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants☆21Updated 4 years ago
- Arabidopsis RNA_-seq downstream analysis shiny app☆31Updated 5 years ago
- KOBAS: a command line tool for identifying significant pathways from genomic data☆30Updated 14 years ago
- lncRNA-screen☆26Updated 7 years ago
- Summer school course materials collection☆25Updated 6 years ago
- R package for inferring copy number from read depth☆32Updated 2 years ago
- SPP - R package for analysis of ChIP-seq and other functional sequencing data☆40Updated 3 years ago
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 3 years ago
- ☆23Updated last month
- 361 Division - Scientific Training, Education and Learning☆28Updated 4 years ago
- A preprocessing pipeline for ChIP-seq, including alignment, quality control, and visualization.☆27Updated 7 years ago
- RPKM for RNASeq counts☆16Updated 4 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated last year
- MeRIP-seq analysis pipeline arranged multiple alignment tools, peakCalling tools, Merge Peaks' methods and methylation analysis methods.☆21Updated 3 years ago
- Plant small RNA target prediction tool☆26Updated 8 years ago
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- RNA editing quantification in deep transcriptome data☆15Updated 2 years ago
- A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data☆14Updated 4 years ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆24Updated 9 years ago
- ☆8Updated 7 years ago
- Demultiplexes a fastq.☆44Updated 4 years ago
- Pipeline for finding circular RNAs from RNA-seq data, based on STAR. Used in (Westholm et al, Cell Reports, 2014).☆16Updated 2 years ago
- Pipeline for identifying viral integration and fusion mRNA reads from NGS data. Manuscript is currently in preparation.☆27Updated 3 years ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 2 years ago
- ConsensusCruncher is a tool that suppresses errors in next-generation sequencing data by using unique molecular identifiers (UMIs) to ama…☆20Updated 2 years ago