ajmazurie / kegg-animate-pathway
Command-line utility to color objects of a KEGG pathway with arbitrary colors
☆32Updated 9 years ago
Related projects ⓘ
Alternatives and complementary repositories for kegg-animate-pathway
- ☆22Updated 3 months ago
- QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.☆31Updated 8 years ago
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 5 years ago
- Full-spectrum copy number variation detection by high-throughput DNA sequencing☆37Updated 3 years ago
- Tool for RNA-Seq analysis.☆38Updated 2 years ago
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 3 years ago
- Pipeline for identifying viral integration and fusion mRNA reads from NGS data. Manuscript is currently in preparation.☆27Updated 3 years ago
- SiNVICT: Ultra-Sensitive Detection of Single Nucleotide Variants and Indels in Circulating Tumour DNA☆27Updated 4 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆34Updated last year
- R package for inferring copy number from read depth☆31Updated 2 years ago
- ☆29Updated 5 years ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆24Updated 9 years ago
- Arabidopsis RNA_-seq downstream analysis shiny app☆31Updated 5 years ago
- RPKM for RNASeq counts☆16Updated 4 years ago
- High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants☆21Updated 4 years ago
- ☆23Updated 2 months ago
- Adapters for trimming☆30Updated 5 years ago
- Summer school course materials collection☆25Updated 6 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆26Updated last year
- tools to find circRNAs in RNA-seq data☆40Updated 6 years ago
- For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…☆33Updated last year
- ☆21Updated 5 months ago
- 361 Division - Scientific Training, Education and Learning☆28Updated 4 years ago
- Detection of Circular RNA and Fusions from RNA-Seq☆32Updated 6 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆35Updated this week
- Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.githu…☆24Updated last month
- a set of NGS pipelines☆24Updated this week
- KOBAS: a command line tool for identifying significant pathways from genomic data☆30Updated 14 years ago