RabadanLab / PegasusLinks
Annotation and Prediction of Oncogenic Gene Fusions in RNAseq
☆12Updated 9 years ago
Alternatives and similar repositories for Pegasus
Users that are interested in Pegasus are comparing it to the libraries listed below
Sorting:
- Algorithm for detecting alternative splicing in a population of single cells. See details in Welch et al., Nucleic Acids Research 2016: h…☆23Updated 9 years ago
- R package for reading in & working with NucleoATAC outputs☆26Updated 7 years ago
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆31Updated 7 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆32Updated last year
- a peak-calling and differential analysis tool for replicated ChIP-Seq data☆37Updated 3 years ago
- processes GoT amplicon data and generates a table of metrics☆32Updated 3 years ago
- Dirichlet Process based methods for subclonal reconstruction of tumours☆32Updated 10 months ago
- ☆16Updated 8 years ago
- Explore the cancer relevance of your gene list☆52Updated last month
- Model-based tumour subclonal deconvolution using population genetics☆34Updated 2 months ago
- Single-CELL rna-seq analysis software☆39Updated 8 years ago
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆17Updated 3 years ago
- GTEx analysis scripts☆20Updated 8 years ago
- Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing.☆70Updated 4 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- Filters for false-positive mutation calls in NGS☆34Updated 6 years ago
- Filtering of PDX samples for mouse derived reads☆28Updated last month
- DriverPower☆26Updated last year
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- ChIP-seq DC and QC Pipeline☆36Updated 4 years ago
- ☆33Updated 3 years ago
- ☆20Updated 8 years ago
- EBI cancer workshop course materials☆22Updated 3 years ago
- Tutorials covering various topics in genomic data analysis.☆16Updated 7 years ago
- ☆41Updated 7 years ago
- Junction Based Analysis of Splicing Events for RNA-Seq☆34Updated 4 months ago
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆72Updated last year
- A toolkit for working with ATAC-seq data.☆24Updated 3 weeks ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆29Updated 5 years ago
- Preprocessing of single-cell RNA-Seq (deprecated)☆62Updated 6 years ago