jzsh2000 / seurat-shinyLinks
☆19Updated last year
Alternatives and similar repositories for seurat-shiny
Users that are interested in seurat-shiny are comparing it to the libraries listed below
Sorting:
- Dichotomous of innate immune landscape☆17Updated 5 years ago
- ☆40Updated 7 years ago
- Arabidopsis RNA_-seq downstream analysis shiny app☆30Updated 5 years ago
- Filtering of PDX samples for mouse derived reads☆28Updated 2 years ago
- An Interactive Consensus Clustering framework for Cross-platform data analysis☆14Updated 3 years ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 5 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. Please download the R package from the RaceID3…☆15Updated 6 years ago
- Bioconductor package esATAC: an Easy-to-use Systematic pipeline for ATAC-seq data analysis☆23Updated 2 years ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 6 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- Repo for Physalia course Analysis of Single Cell RNA-Seq data☆32Updated 5 years ago
- ☆29Updated 6 years ago
- Process m6A/MeRIP-seq data in a single or batch job mode☆20Updated 5 years ago
- Toolbox with R scripts☆38Updated 6 years ago
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆36Updated 3 years ago
- ☆44Updated 6 years ago
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆74Updated 2 years ago
- Algorithm for detecting alternative splicing in a population of single cells. See details in Welch et al., Nucleic Acids Research 2016: h…☆21Updated 8 years ago
- documentation for trackViewer☆29Updated 5 years ago
- workshop website on readthedocs☆19Updated last month
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- Scripts for processing single liver cells RNA-Seq 10X Genomics Data☆24Updated 6 years ago
- Codes associated with the Poran, Nötzel et al. paper titled "Single-cell RNA-seq reveals a signature of sexual commitment in malaria para…☆10Updated 7 years ago
- Main repository for Drews et al. (Nature, 2022)☆41Updated last year
- CNApp represents the first web tool to perform a comprehensive and integrative analysis of copy number alterations (CNAs) in a user-frien…☆20Updated 5 years ago
- Find CNVs in single cell sequencing data.☆18Updated 2 years ago
- Clone of the Bioconductor repository for the DropletUtils package.☆59Updated last week
- A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data☆15Updated 4 years ago
- ☆55Updated 4 years ago
- Reference transcriptome indices build from kallisto for popular organisms☆42Updated last year