☆14Dec 21, 2022Updated 3 years ago
Alternatives and similar repositories for Joung_TFAtlas_Manuscript
Users that are interested in Joung_TFAtlas_Manuscript are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Oct 10, 2024Updated last year
- ☆17Feb 16, 2024Updated 2 years ago
- PROGENY Python implementation☆12Apr 5, 2022Updated 4 years ago
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆16Jul 3, 2012Updated 13 years ago
- A post-clustering differential expression (DE) method robust to false-positive inflation caused by double dipping☆29Apr 5, 2026Updated last month
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Inference of gene dependency from RNAi screening datasets.☆19Apr 9, 2020Updated 6 years ago
- GEO RNA-seq Experiments Processing Pipeline☆22Oct 25, 2019Updated 6 years ago
- Tools for sgRNA calling in direct capture Perturb-seq data☆41Jun 18, 2023Updated 2 years ago
- Probabilistic gene expression barcodes for cell type annotation☆27Apr 26, 2022Updated 4 years ago
- A Tidy Framework to Hack Gene Expression Signatures☆21Apr 20, 2025Updated last year
- Subsampling of high-throughput sequencing count data☆20May 10, 2019Updated 6 years ago
- Tools for assessing clustering robustness☆32Apr 2, 2026Updated last month
- ☆14Nov 20, 2024Updated last year
- Implementation of entropy of mixing algorithm in python☆10Oct 19, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- R package of utilities for handling paths, files and directories☆19Jan 14, 2019Updated 7 years ago
- The million-scale method for single-cell analysis☆10Jul 6, 2023Updated 2 years ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆98Nov 30, 2023Updated 2 years ago
- An Easy to Use Analysis System for All Human Public bulk RNAseq Data!☆19Dec 8, 2022Updated 3 years ago
- ☆38Apr 16, 2025Updated last year
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆30Apr 16, 2020Updated 6 years ago
- Python implementation of the Invariant Causal Prediction (ICP) algorithm, from the 2015 paper "Causal inference using invariant predictio…☆25Feb 15, 2024Updated 2 years ago
- Identifying bioactive peptide function using multi-label deep learning☆10Nov 16, 2021Updated 4 years ago
- A variational autoencoder-based approach for copy number variation inference using single-cell transcriptomics☆11Mar 11, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Automated ingestion and conversion of various single-cell data formats, within and across species☆13Jan 26, 2026Updated 3 months ago
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆13Sep 20, 2022Updated 3 years ago
- Simple scVI implementation☆12Apr 27, 2026Updated last week
- Code for reproducing "Exploring genetic interaction manifolds constructed from rich single-cell phenotypes"☆68Jun 6, 2020Updated 5 years ago
- ☆15Dec 18, 2024Updated last year
- An R package for detecting Gene-by-Environment (GxE) interaction effects on the transcriptome using Allele Specific Expression quantified…☆22Oct 27, 2021Updated 4 years ago
- Non-negative Independent Factor Analysis for single cell RNA-seq☆12Feb 25, 2022Updated 4 years ago
- inference of transcription factor activity at the single cell level☆27Dec 16, 2025Updated 4 months ago
- ☆23Jan 6, 2026Updated 4 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Efficient algorithms for designing orthogonal DNA sequence libraries☆13Oct 23, 2024Updated last year
- trans-species prediction of TFBS in plants☆14Apr 26, 2021Updated 5 years ago
- ☆14Jul 1, 2025Updated 10 months ago
- ☆15Apr 26, 2022Updated 4 years ago
- RNA-seq data comprehensive data analysis toolbox☆20Oct 18, 2022Updated 3 years ago
- Python CLI for alignment-free genomics.☆13Feb 11, 2026Updated 2 months ago
- ☆11Jan 15, 2020Updated 6 years ago